BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029143
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620990.1| Pentatricopeptide repeat-containing protein ...   263   1e-68
gb|ABN09787.1| Pentatricopeptide repeat [Medicago truncatula]         263   1e-68
ref|XP_003590297.1| Pentatricopeptide repeat-containing protein ...   261   5e-68
ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containi...   253   9e-66
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   215   3e-54

>ref|XP_003620990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496005|gb|AES77208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 422

 Score =  263 bits (671), Expect = 1e-68
 Identities = 121/149 (81%), Positives = 138/149 (92%), Gaps = 1/149 (0%)
 Frame = +2

Query: 2   PDTLFYNSFIYTLGRAGRIDEATHVLKVAMPKDGVAPNTSTYNSMISMFCHHAPEKRAFD 181
           PDTLF+NSFIYT+GRAGRID+ATH+ KVAMPK  VAPNTSTYNSMISMFC++A ++RAFD
Sbjct: 267 PDTLFFNSFIYTMGRAGRIDDATHIFKVAMPKASVAPNTSTYNSMISMFCYYAQKERAFD 326

Query: 182 MLKEMEDSGPCKPDVQT-YHPLIKSCFKTGKIDGWLNDILNDMVNNHHIGLDLSTYTLLI 358
           +LKEME SG CKPD+QT YHPLIKSCFK  K+D WLNDIL+DMVN +HIGLDLSTYTLLI
Sbjct: 327 ILKEMEKSGLCKPDIQTYYHPLIKSCFKMRKVDTWLNDILSDMVNKYHIGLDLSTYTLLI 386

Query: 359 HGLCRADRCKWAFSLFEEMIDQDIVPRYR 445
           HGLCRADRCKWAF+LFEEM+DQDI+PRY+
Sbjct: 387 HGLCRADRCKWAFNLFEEMVDQDIMPRYK 415


>gb|ABN09787.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 200

 Score =  263 bits (671), Expect = 1e-68
 Identities = 121/149 (81%), Positives = 138/149 (92%), Gaps = 1/149 (0%)
 Frame = +2

Query: 2   PDTLFYNSFIYTLGRAGRIDEATHVLKVAMPKDGVAPNTSTYNSMISMFCHHAPEKRAFD 181
           PDTLF+NSFIYT+GRAGRID+ATH+ KVAMPK  VAPNTSTYNSMISMFC++A ++RAFD
Sbjct: 45  PDTLFFNSFIYTMGRAGRIDDATHIFKVAMPKASVAPNTSTYNSMISMFCYYAQKERAFD 104

Query: 182 MLKEMEDSGPCKPDVQT-YHPLIKSCFKTGKIDGWLNDILNDMVNNHHIGLDLSTYTLLI 358
           +LKEME SG CKPD+QT YHPLIKSCFK  K+D WLNDIL+DMVN +HIGLDLSTYTLLI
Sbjct: 105 ILKEMEKSGLCKPDIQTYYHPLIKSCFKMRKVDTWLNDILSDMVNKYHIGLDLSTYTLLI 164

Query: 359 HGLCRADRCKWAFSLFEEMIDQDIVPRYR 445
           HGLCRADRCKWAF+LFEEM+DQDI+PRY+
Sbjct: 165 HGLCRADRCKWAFNLFEEMVDQDIMPRYK 193


>ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479345|gb|AES60548.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 661

 Score =  261 bits (666), Expect = 5e-68
 Identities = 123/148 (83%), Positives = 133/148 (89%)
 Frame = +2

Query: 2   PDTLFYNSFIYTLGRAGRIDEATHVLKVAMPKDGVAPNTSTYNSMISMFCHHAPEKRAFD 181
           PDTLF+NS IYTLGRAGRID+ATHV KVAMPK  VAPNTSTYNSMISMFC++A E+RAF 
Sbjct: 326 PDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFG 385

Query: 182 MLKEMEDSGPCKPDVQTYHPLIKSCFKTGKIDGWLNDILNDMVNNHHIGLDLSTYTLLIH 361
           +LKEME SG CKPD+QTYHPLIKSCFK  +ID WLNDILNDMVN +HIGLDLSTYTLLIH
Sbjct: 386 ILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIH 445

Query: 362 GLCRADRCKWAFSLFEEMIDQDIVPRYR 445
           GL RADRCKWAF LFEEM DQDIVPRY+
Sbjct: 446 GLYRADRCKWAFDLFEEMADQDIVPRYK 473


>ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Glycine max]
          Length = 490

 Score =  253 bits (647), Expect = 9e-66
 Identities = 116/148 (78%), Positives = 132/148 (89%)
 Frame = +2

Query: 2   PDTLFYNSFIYTLGRAGRIDEATHVLKVAMPKDGVAPNTSTYNSMISMFCHHAPEKRAFD 181
           PDTLF+NS I+TLGRAGR+D+A  V KV MPK GV+PNTSTYNSMISMFC+HA EKRA +
Sbjct: 315 PDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALE 374

Query: 182 MLKEMEDSGPCKPDVQTYHPLIKSCFKTGKIDGWLNDILNDMVNNHHIGLDLSTYTLLIH 361
           +LKEME+SG CKPD QTYHPLIKSCF++GKIDG L++ILNDM+N  H+ LDLSTYTLLIH
Sbjct: 375 ILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLLIH 434

Query: 362 GLCRADRCKWAFSLFEEMIDQDIVPRYR 445
           GLCR DRC WAFSLFEEMIDQDI+PRYR
Sbjct: 435 GLCREDRCNWAFSLFEEMIDQDIIPRYR 462


>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score =  215 bits (548), Expect = 3e-54
 Identities = 95/148 (64%), Positives = 126/148 (85%)
 Frame = +2

Query: 2   PDTLFYNSFIYTLGRAGRIDEATHVLKVAMPKDGVAPNTSTYNSMISMFCHHAPEKRAFD 181
           PDTLFYN+ I+TLGRAG++ EA  V +V MPK GV PNTSTYNSMI+MFCHH+ E++A +
Sbjct: 318 PDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALN 377

Query: 182 MLKEMEDSGPCKPDVQTYHPLIKSCFKTGKIDGWLNDILNDMVNNHHIGLDLSTYTLLIH 361
           +L+E+E+S  CKPD+QTY+P++KSCFKTGKID  L++ L+DMVN HH+ LD+S YTLLIH
Sbjct: 378 LLREIENSTFCKPDIQTYYPVLKSCFKTGKIDS-LSNFLDDMVNKHHLSLDVSAYTLLIH 436

Query: 362 GLCRADRCKWAFSLFEEMIDQDIVPRYR 445
           GLCRA++C+W ++LFEEM+ + I PRY+
Sbjct: 437 GLCRANKCEWGYNLFEEMVGKAITPRYK 464



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/145 (27%), Positives = 74/145 (51%)
 Frame = +2

Query: 2   PDTLFYNSFIYTLGRAGRIDEATHVLKVAMPKDGVAPNTSTYNSMISMFCHHAPEKRAFD 181
           P+T  +N FI+   +A R+DEA   ++  M   G  P   +Y+++I  +C  +  ++ ++
Sbjct: 213 PNTHTFNIFIHGWCKANRVDEAEWTIQ-EMKGHGCRPCVISYSTIIQSYCRQSNFRKVYE 271

Query: 182 MLKEMEDSGPCKPDVQTYHPLIKSCFKTGKIDGWLNDILNDMVNNHHIGLDLSTYTLLIH 361
           +L +M+  G C P+V TY  ++ S  K  + +  L   + + + +     D   Y  LIH
Sbjct: 272 LLDDMQAQG-CAPNVVTYTTIMCSLTKVEQFEEALQ--IAERMRSVGCKPDTLFYNALIH 328

Query: 362 GLCRADRCKWAFSLFEEMIDQDIVP 436
            L RA + + A  +FE  + +  VP
Sbjct: 329 TLGRAGQLREAVRVFEVEMPKTGVP 353