BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029141
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002149735.1| RNA polymerase beta' subunit [Cicer arietinu...   176   1e-45
ref|YP_003587566.1| RNA polymerase beta'' subunit [Pisum sativum...   175   2e-45
sp|P12227.1|RPOC2_PEA RecName: Full=DNA-directed RNA polymerase ...   175   2e-45
ref|YP_001381726.2| RNA polymerase beta' subunit [Medicago trunc...   174   4e-45
ref|XP_003606032.1| DNA-directed RNA polymerase subunit beta [Me...   174   4e-45

>ref|YP_002149735.1| RNA polymerase beta' subunit [Cicer arietinum]
           gi|197089802|gb|ACH41072.1| RNA polymerase beta' subunit
           [Cicer arietinum]
          Length = 1376

 Score =  176 bits (447), Expect(2) = 1e-45
 Identities = 89/109 (81%), Positives = 95/109 (87%)
 Frame = -2

Query: 398 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 219
           +FQKEDLIEYRGIKELKPK Q KVDRFFFIPEEVHILPESSSIM+RNNS++GI TPITLN
Sbjct: 638 LFQKEDLIEYRGIKELKPKYQNKVDRFFFIPEEVHILPESSSIMIRNNSLVGIGTPITLN 697

Query: 218 IRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTV 72
           IRSRVGGLVR           IFSG+IHFPGEMDKISRHS+ILIPPGTV
Sbjct: 698 IRSRVGGLVRLEKKKKKIELKIFSGNIHFPGEMDKISRHSSILIPPGTV 746



 Score = 32.0 bits (71), Expect(2) = 1e-45
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 36  NWIYVQWIATTK 1
           NWIYVQWIATTK
Sbjct: 759 NWIYVQWIATTK 770


>ref|YP_003587566.1| RNA polymerase beta'' subunit [Pisum sativum]
           gi|293338591|gb|ADE43564.1| RNA polymerase beta''
           subunit (chloroplast) [Pisum sativum]
          Length = 1367

 Score =  175 bits (443), Expect(2) = 2e-45
 Identities = 88/109 (80%), Positives = 94/109 (86%)
 Frame = -2

Query: 398 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 219
           IFQKED IEYRGIKELKPK QI+VDRFFFIPEEVHILP+SSS+MVRNNS++GI TPIT N
Sbjct: 636 IFQKEDFIEYRGIKELKPKSQIQVDRFFFIPEEVHILPKSSSLMVRNNSLVGIGTPITFN 695

Query: 218 IRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTV 72
           IRSRVGGLVR           IFSG+IHFPGEMDKISRHSAILIPPGTV
Sbjct: 696 IRSRVGGLVRLDKKKKKIELKIFSGNIHFPGEMDKISRHSAILIPPGTV 744



 Score = 32.3 bits (72), Expect(2) = 2e-45
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 39  ENWIYVQWIATTK 1
           +NWIYVQWIATTK
Sbjct: 756 KNWIYVQWIATTK 768


>sp|P12227.1|RPOC2_PEA RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta''; Short=RNA polymerase subunit beta''
           gi|829325|emb|CAA27545.1| unnamed protein product [Pisum
           sativum]
          Length = 1163

 Score =  175 bits (443), Expect(2) = 2e-45
 Identities = 88/109 (80%), Positives = 94/109 (86%)
 Frame = -2

Query: 398 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 219
           IFQKED IEYRGIKELKPK QI+VDRFFFIPEEVHILP+SSS+MVRNNS++GI TPIT N
Sbjct: 432 IFQKEDFIEYRGIKELKPKSQIQVDRFFFIPEEVHILPKSSSLMVRNNSLVGIGTPITFN 491

Query: 218 IRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTV 72
           IRSRVGGLVR           IFSG+IHFPGEMDKISRHSAILIPPGTV
Sbjct: 492 IRSRVGGLVRLDKKKKKIELKIFSGNIHFPGEMDKISRHSAILIPPGTV 540



 Score = 32.3 bits (72), Expect(2) = 2e-45
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 39  ENWIYVQWIATTK 1
           +NWIYVQWIATTK
Sbjct: 552 KNWIYVQWIATTK 564


>ref|YP_001381726.2| RNA polymerase beta' subunit [Medicago truncatula]
          Length = 1374

 Score =  174 bits (442), Expect(2) = 4e-45
 Identities = 87/109 (79%), Positives = 93/109 (85%)
 Frame = -2

Query: 398 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 219
           +FQKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT N
Sbjct: 641 VFQKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFN 700

Query: 218 IRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTV 72
           IRSRVGGLVR           +FSG+IHFPGE DKISRHS+ILIPPGTV
Sbjct: 701 IRSRVGGLVRLEKKKKKIELKLFSGNIHFPGERDKISRHSSILIPPGTV 749



 Score = 32.0 bits (71), Expect(2) = 4e-45
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 36  NWIYVQWIATTK 1
           NWIYVQWIATTK
Sbjct: 761 NWIYVQWIATTK 772


>ref|XP_003606032.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355507087|gb|AES88229.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1368

 Score =  174 bits (442), Expect(2) = 4e-45
 Identities = 87/109 (79%), Positives = 93/109 (85%)
 Frame = -2

Query: 398 IFQKEDLIEYRGIKELKPKCQIKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTPITLN 219
           +FQKED IEYRGIKELKPK QIKVDRFFFIPEEVHILPESSSIMVRNNS++GI TPIT N
Sbjct: 641 VFQKEDFIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFN 700

Query: 218 IRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKISRHSAILIPPGTV 72
           IRSRVGGLVR           +FSG+IHFPGE DKISRHS+ILIPPGTV
Sbjct: 701 IRSRVGGLVRLEKKKKKIELKLFSGNIHFPGERDKISRHSSILIPPGTV 749



 Score = 32.0 bits (71), Expect(2) = 4e-45
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -1

Query: 36  NWIYVQWIATTK 1
           NWIYVQWIATTK
Sbjct: 761 NWIYVQWIATTK 772