BLASTX nr result

ID: Glycyrrhiza24_contig00029136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029136
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM15645.1| E1 protein [Glycine max] gi|387848910|dbj|BAM156...   244   2e-62
dbj|BAM15646.1| e1-as protein [Glycine max] gi|387848912|dbj|BAM...   241   1e-61
dbj|BAM15654.1| e1-fs protein [Glycine max]                           239   7e-61
ref|XP_003595647.1| B3 domain-containing protein [Medicago trunc...   237   2e-60
ref|XP_002305818.1| predicted protein [Populus trichocarpa] gi|2...   138   1e-30

>dbj|BAM15645.1| E1 protein [Glycine max] gi|387848910|dbj|BAM15647.1| repressive
           flowering regulator (RFR) [Glycine max]
           gi|387848914|dbj|BAM15649.1| E1 protein [Glycine max]
           gi|387848918|dbj|BAM15651.1| E1 protein [Glycine max]
          Length = 174

 Score =  244 bits (622), Expect = 2e-62
 Identities = 126/171 (73%), Positives = 134/171 (78%)
 Frame = +3

Query: 147 EREQFQKKRKSTITYDDAXXXXXXXXXXXXXXXXXXXXXXXKASGSVSTTLKLYDDPWKI 326
           EREQ QKKRKSTI                              +  VSTTLKLYDDPWKI
Sbjct: 7   EREQCQKKRKSTIC------EASNFRTSRRRFCSNNKNEEEMNNKGVSTTLKLYDDPWKI 60

Query: 327 KKTLTDSDLGILSRLLLAADLVKKQVLPMLGVDHARAAETEEGSPVRVWDLDTKSMHQLV 506
           KKTLTDSDLGILSRLLLAADLVKKQ+LPMLG  HARAAETE G+PVRVWD+DTKSMHQLV
Sbjct: 61  KKTLTDSDLGILSRLLLAADLVKKQILPMLGAYHARAAETE-GTPVRVWDMDTKSMHQLV 119

Query: 507 LKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFCVLQRA 659
           LKRWSSSKSYVLIGKWNQDFVRRR+L+KGDEIGFHWDPYNC FNFCVL++A
Sbjct: 120 LKRWSSSKSYVLIGKWNQDFVRRRDLRKGDEIGFHWDPYNCVFNFCVLKQA 170


>dbj|BAM15646.1| e1-as protein [Glycine max] gi|387848912|dbj|BAM15648.1| e1-as
           protein [Glycine max] gi|387848916|dbj|BAM15650.1| e1-as
           protein [Glycine max] gi|387848920|dbj|BAM15652.1| e1-as
           protein [Glycine max] gi|387848922|dbj|BAM15653.1| e1-as
           protein [Glycine max]
          Length = 174

 Score =  241 bits (616), Expect = 1e-61
 Identities = 125/171 (73%), Positives = 133/171 (77%)
 Frame = +3

Query: 147 EREQFQKKRKSTITYDDAXXXXXXXXXXXXXXXXXXXXXXXKASGSVSTTLKLYDDPWKI 326
           EREQ QKK KSTI                              +  VSTTLKLYDDPWKI
Sbjct: 7   EREQCQKKTKSTIC------EASNFRTSRRRFCSNNKNEEEMNNKGVSTTLKLYDDPWKI 60

Query: 327 KKTLTDSDLGILSRLLLAADLVKKQVLPMLGVDHARAAETEEGSPVRVWDLDTKSMHQLV 506
           KKTLTDSDLGILSRLLLAADLVKKQ+LPMLG  HARAAETE G+PVRVWD+DTKSMHQLV
Sbjct: 61  KKTLTDSDLGILSRLLLAADLVKKQILPMLGAYHARAAETE-GTPVRVWDMDTKSMHQLV 119

Query: 507 LKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFCVLQRA 659
           LKRWSSSKSYVLIGKWNQDFVRRR+L+KGDEIGFHWDPYNC FNFCVL++A
Sbjct: 120 LKRWSSSKSYVLIGKWNQDFVRRRDLRKGDEIGFHWDPYNCVFNFCVLKQA 170


>dbj|BAM15654.1| e1-fs protein [Glycine max]
          Length = 133

 Score =  239 bits (609), Expect = 7e-61
 Identities = 114/125 (91%), Positives = 121/125 (96%)
 Frame = +3

Query: 285 VSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQVLPMLGVDHARAAETEEGSPV 464
           VSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQ+LPMLG  HARAAETE G+PV
Sbjct: 6   VSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGAYHARAAETE-GTPV 64

Query: 465 RVWDLDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFC 644
           RVWD+DTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRR+L+KGDEIGFHWDPYNC FNFC
Sbjct: 65  RVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLRKGDEIGFHWDPYNCVFNFC 124

Query: 645 VLQRA 659
           VL++A
Sbjct: 125 VLKQA 129


>ref|XP_003595647.1| B3 domain-containing protein [Medicago truncatula]
           gi|355484695|gb|AES65898.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 181

 Score =  237 bits (605), Expect = 2e-60
 Identities = 125/176 (71%), Positives = 134/176 (76%), Gaps = 2/176 (1%)
 Frame = +3

Query: 147 EREQFQKKRKSTITYDDAXXXXXXXXXXXXXXXXXXXXXXXKAS--GSVSTTLKLYDDPW 320
           E EQ QKKRKS    D+A                            GSVSTTLKLYDDPW
Sbjct: 9   EMEQLQKKRKSC---DEASTNLKTSRRRLCNNKNEEQNNNQNNDNKGSVSTTLKLYDDPW 65

Query: 321 KIKKTLTDSDLGILSRLLLAADLVKKQVLPMLGVDHARAAETEEGSPVRVWDLDTKSMHQ 500
           KIKK+LT+SDLGILSRLLLAADLVKKQ+LPML VD ARAAETEEGSPV VWD++T SMH+
Sbjct: 66  KIKKSLTESDLGILSRLLLAADLVKKQILPMLDVDDARAAETEEGSPVNVWDMETNSMHE 125

Query: 501 LVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFCVLQRAPMP 668
           LVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGF WDP+N AFNFCVL+RA  P
Sbjct: 126 LVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFQWDPFNRAFNFCVLKRAIPP 181


>ref|XP_002305818.1| predicted protein [Populus trichocarpa] gi|222848782|gb|EEE86329.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  138 bits (348), Expect = 1e-30
 Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 4/134 (2%)
 Frame = +3

Query: 270 KASGSVSTTLKLYD--DPWKIKKTLTDSDLGILSRLLLAADLVKKQVLPMLGVDHARAA- 440
           ++S  VST L LY   DP+ IKK +  SDLG L RLL+ +DLV+K +LP L  D  +   
Sbjct: 50  ESSRGVSTHLSLYHHYDPFTIKKKMKPSDLGNLCRLLVPSDLVEKYILPFLNTDQIKQVN 109

Query: 441 -ETEEGSPVRVWDLDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWD 617
            ET  G  V VWD++T+SMHQLV KRWS+S+SY+    W +DFVRRR L +GDEIG +WD
Sbjct: 110 QETNLGLKVSVWDMNTQSMHQLVFKRWSTSRSYIFNDGWTKDFVRRRNLVEGDEIGLYWD 169

Query: 618 PYNCAFNFCVLQRA 659
            Y+  FNF VL RA
Sbjct: 170 TYHSRFNFNVLSRA 183


Top