BLASTX nr result

ID: Glycyrrhiza24_contig00029120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029120
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like ...   246   1e-63
ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago t...   233   1e-59
gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago trun...   233   1e-59
ref|XP_002525941.1| ubiquitin-protein ligase, putative [Ricinus ...   178   5e-43
ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transp...   177   6e-43

>ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like [Glycine max]
          Length = 5112

 Score =  246 bits (629), Expect = 1e-63
 Identities = 124/136 (91%), Positives = 130/136 (95%)
 Frame = +1

Query: 1    LTVENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSIN 180
            LTVENG+FSYNDRTLTLLAHTLF RVGS+GSQLRTKICR YVAFVVEKAKTVC+ CPSIN
Sbjct: 642  LTVENGSFSYNDRTLTLLAHTLFCRVGSSGSQLRTKICRVYVAFVVEKAKTVCINCPSIN 701

Query: 181  DLVGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVV 360
            DLVGTLPSLFHIEVVLMAFHLSSEGEKAVMA LI+STLKEVA+L LDLNST LTCWALVV
Sbjct: 702  DLVGTLPSLFHIEVVLMAFHLSSEGEKAVMAKLIFSTLKEVASLILDLNSTHLTCWALVV 761

Query: 361  SRLILVLRHMIFHQQT 408
            SRLIL+LRHMIFHQQT
Sbjct: 762  SRLILILRHMIFHQQT 777


>ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago truncatula]
            gi|355496574|gb|AES77777.1| E3 ubiquitin-protein ligase
            UBR4 [Medicago truncatula]
          Length = 5158

 Score =  233 bits (594), Expect = 1e-59
 Identities = 119/136 (87%), Positives = 125/136 (91%)
 Frame = +1

Query: 1    LTVENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSIN 180
            L VENGAFSYNDRTLTLLAH LF+RVGS GSQLRTKI RGYVAFVVEKAK+VCV CPSIN
Sbjct: 699  LIVENGAFSYNDRTLTLLAHALFSRVGSVGSQLRTKIFRGYVAFVVEKAKSVCVNCPSIN 758

Query: 181  DLVGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVV 360
            +LVGTLPSLFHIEVVLMAFHLS   EK VMA+LI+STLKEVAN  LDLNS+LLTCWALVV
Sbjct: 759  ELVGTLPSLFHIEVVLMAFHLSCAEEKGVMANLIFSTLKEVANPVLDLNSSLLTCWALVV 818

Query: 361  SRLILVLRHMIFHQQT 408
            SRLILVLRHMIFHQQT
Sbjct: 819  SRLILVLRHMIFHQQT 834


>gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago truncatula]
          Length = 2165

 Score =  233 bits (594), Expect = 1e-59
 Identities = 119/136 (87%), Positives = 125/136 (91%)
 Frame = +1

Query: 1   LTVENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSIN 180
           L VENGAFSYNDRTLTLLAH LF+RVGS GSQLRTKI RGYVAFVVEKAK+VCV CPSIN
Sbjct: 583 LIVENGAFSYNDRTLTLLAHALFSRVGSVGSQLRTKIFRGYVAFVVEKAKSVCVNCPSIN 642

Query: 181 DLVGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVV 360
           +LVGTLPSLFHIEVVLMAFHLS   EK VMA+LI+STLKEVAN  LDLNS+LLTCWALVV
Sbjct: 643 ELVGTLPSLFHIEVVLMAFHLSCAEEKGVMANLIFSTLKEVANPVLDLNSSLLTCWALVV 702

Query: 361 SRLILVLRHMIFHQQT 408
           SRLILVLRHMIFHQQT
Sbjct: 703 SRLILVLRHMIFHQQT 718


>ref|XP_002525941.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534770|gb|EEF36461.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 4466

 Score =  178 bits (451), Expect = 5e-43
 Identities = 86/133 (64%), Positives = 111/133 (83%)
 Frame = +1

Query: 1   LTVENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSIN 180
           L VE+  F YND+TLTLL+HTL +RVG AGSQLRTK+ +GYV F+V+KAK VC  CPSI 
Sbjct: 392 LNVEDDTFVYNDQTLTLLSHTLSSRVGLAGSQLRTKLFKGYVGFIVDKAKAVCSNCPSIK 451

Query: 181 DLVGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVV 360
           ++VGTLPSLFHIE+++MAFHLSSE EKA +A+LI+S+++ V   +   ++T L+CWALVV
Sbjct: 452 EVVGTLPSLFHIEILVMAFHLSSEQEKAALANLIFSSIRAVDAPSSGFSNTQLSCWALVV 511

Query: 361 SRLILVLRHMIFH 399
           SRLILVLRHM+F+
Sbjct: 512 SRLILVLRHMLFY 524


>ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transport protein BIG-like
            [Vitis vinifera]
          Length = 6279

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/133 (65%), Positives = 109/133 (81%)
 Frame = +1

Query: 1    LTVENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSIN 180
            L V++G F YND TLTLLAH+L  RVG AGSQLR+KI RGY+ F+VEK K +  KCPS+ 
Sbjct: 1796 LNVDSGCFIYNDLTLTLLAHSLICRVGLAGSQLRSKIYRGYIDFIVEKTKALYSKCPSLK 1855

Query: 181  DLVGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVV 360
            +L GTLPS+FHIE++LMAFHLSSEGEKA +A+LI+S+L+ +   A   NST L+CWA++V
Sbjct: 1856 ELFGTLPSVFHIEILLMAFHLSSEGEKATLANLIFSSLRTIDAPADGFNSTQLSCWAILV 1915

Query: 361  SRLILVLRHMIFH 399
            SRLILVLRHMIF+
Sbjct: 1916 SRLILVLRHMIFY 1928


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