BLASTX nr result

ID: Glycyrrhiza24_contig00029119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029119
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616697.1| DNA repair and recombination protein RAD54-l...   145   3e-33
ref|XP_003545218.1| PREDICTED: uncharacterized protein LOC100811...   142   3e-32
ref|XP_003518422.1| PREDICTED: uncharacterized protein LOC100785...   132   3e-29
gb|AET79246.1| chromatin remodeling 38 [Glycine max]                   95   7e-18
ref|XP_003552832.1| PREDICTED: uncharacterized protein LOC100781...    95   7e-18

>ref|XP_003616697.1| DNA repair and recombination protein RAD54-like protein [Medicago
           truncatula] gi|355518032|gb|AES99655.1| DNA repair and
           recombination protein RAD54-like protein [Medicago
           truncatula]
          Length = 1380

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/98 (73%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   KKVSFCARSAENKLVYQILGGDTI-STSSNTESHIDVVNLRVDNGVLVPIVSQVAITNPR 178
           K VSFCARS ENK+VYQILGGD+  S+SSNTESHIDV+  R D+G+LVPIVSQVAITN +
Sbjct: 242 KNVSFCARSVENKMVYQILGGDSSNSSSSNTESHIDVIGFRTDDGMLVPIVSQVAITNTK 301

Query: 179 GAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYLGC 292
            A+HA ES  D+ S SY+V+GLRRSKRRHVQPERY+GC
Sbjct: 302 RADHAHESRADEASSSYNVDGLRRSKRRHVQPERYVGC 339


>ref|XP_003545218.1| PREDICTED: uncharacterized protein LOC100811703 [Glycine max]
          Length = 1261

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/97 (71%), Positives = 79/97 (81%)
 Frame = +2

Query: 2   KKVSFCARSAENKLVYQILGGDTISTSSNTESHIDVVNLRVDNGVLVPIVSQVAITNPRG 181
           KKVS C RS ++KLVYQ+LG DT+STS N ESHIDVVN + D G+LVPIVSQVA    + 
Sbjct: 200 KKVSICVRSLQDKLVYQVLGRDTVSTSLNNESHIDVVNFKTDKGMLVPIVSQVATLKTKR 259

Query: 182 AEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYLGC 292
            +   ESHEDKESPSY+VEGLRRSKRR+VQPERYLGC
Sbjct: 260 VDPEQESHEDKESPSYNVEGLRRSKRRNVQPERYLGC 296


>ref|XP_003518422.1| PREDICTED: uncharacterized protein LOC100785036 [Glycine max]
          Length = 1254

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/98 (69%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   KKVSFCARSAENKLVYQILGGDT-ISTSSNTESHIDVVNLRVDNGVLVPIVSQVAITNPR 178
           KKVSFC RS E+KLVYQ+L  DT +STS N ESHIDVVN + + G L  IVSQVA    +
Sbjct: 201 KKVSFCVRSLEDKLVYQVLERDTTVSTSLNNESHIDVVNFKTEKGTLFSIVSQVATLKTK 260

Query: 179 GAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYLGC 292
             E   ESHEDKESPSY+VEGLRRSKRR+VQPERYLGC
Sbjct: 261 RVEPEQESHEDKESPSYNVEGLRRSKRRNVQPERYLGC 298


>gb|AET79246.1| chromatin remodeling 38 [Glycine max]
          Length = 1245

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/102 (50%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
 Frame = +2

Query: 2   KKVSFCARSAENKLVYQILGGDTISTSSNTESHIDVVNLRV-DNGVLVPIVSQVAI---- 166
           +KVSFCARS EN +VYQILG D  ++S   +S I VVN +V ++G+ +P++  V +    
Sbjct: 213 RKVSFCARSVENNIVYQILGSDATTSSLYMDSEISVVNFKVNEDGMQMPVIHLVDLFETD 272

Query: 167 TNPRGAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYLGC 292
           TN  G +H  +SH D+   SY  EGLRRSKRR++QPERY  C
Sbjct: 273 TNTSGDKH--DSHYDEVPSSYGFEGLRRSKRRNIQPERYSDC 312


>ref|XP_003552832.1| PREDICTED: uncharacterized protein LOC100781856 [Glycine max]
          Length = 1243

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/102 (50%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
 Frame = +2

Query: 2   KKVSFCARSAENKLVYQILGGDTISTSSNTESHIDVVNLRV-DNGVLVPIVSQVAI---- 166
           +KVSFCARS EN +VYQILG D  ++S   +S I VVN +V ++G+ +P++  V +    
Sbjct: 213 RKVSFCARSVENNIVYQILGSDATTSSLYMDSEISVVNFKVNEDGMQMPVIHLVDLFETD 272

Query: 167 TNPRGAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYLGC 292
           TN  G +H  +SH D+   SY  EGLRRSKRR++QPERY  C
Sbjct: 273 TNTSGDKH--DSHYDEVPSSYGFEGLRRSKRRNIQPERYSDC 312


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