BLASTX nr result

ID: Glycyrrhiza24_contig00029106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029106
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330034.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002277646.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA-bin...    83   3e-14
emb|CBI39602.3| unnamed protein product [Vitis vinifera]               83   3e-14
emb|CAN71813.1| hypothetical protein VITISV_023418 [Vitis vinifera]    83   3e-14
ref|XP_004165927.1| PREDICTED: LOW QUALITY PROTEIN: rab9 effecto...    78   8e-13

>ref|XP_002330034.1| predicted protein [Populus trichocarpa] gi|222871459|gb|EEF08590.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
 Frame = +1

Query: 70  IGAEVRGKIDGAFDSGLLMTAAVNGRIFRGVLFAPGAGVVSNSVEPNCSPPCLLPSTQVP 249
           +GAEVRGK+DGAFDSGLLMTA VNG++FRGVLF+P  G VS       +     P+TQ+P
Sbjct: 356 VGAEVRGKVDGAFDSGLLMTATVNGKLFRGVLFSPAPGFVSRGA--ILAQNHASPATQIP 413

Query: 250 LM----NSNHVDNFRDSQHVTTCS 309
           ++    NSNH+D  + S H TT S
Sbjct: 414 IVHQFPNSNHIDTLKPSHHPTTFS 437


>ref|XP_002277646.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA-binding domain-containing
           protein 4 [Vitis vinifera]
          Length = 637

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = +1

Query: 1   RKGAQQHQATEQKPLGRGHAQHLIGAEVRGKIDGAFDSGLLMTAAVNGRIFRGVLFAPGA 180
           R+  Q HQ  EQKPL       LIGAE+RGK+DGAFDSG LMTA VNG+IFRGVLF+PG 
Sbjct: 486 RQQLQYHQPPEQKPLD------LIGAEIRGKVDGAFDSGYLMTATVNGQIFRGVLFSPGP 539

Query: 181 GVVSNSV 201
            +VS  +
Sbjct: 540 AMVSRGI 546


>emb|CBI39602.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = +1

Query: 1   RKGAQQHQATEQKPLGRGHAQHLIGAEVRGKIDGAFDSGLLMTAAVNGRIFRGVLFAPGA 180
           R+  Q HQ  EQKPL       LIGAE+RGK+DGAFDSG LMTA VNG+IFRGVLF+PG 
Sbjct: 489 RQQLQYHQPPEQKPLD------LIGAEIRGKVDGAFDSGYLMTATVNGQIFRGVLFSPGP 542

Query: 181 GVVSNSV 201
            +VS  +
Sbjct: 543 AMVSRGI 549


>emb|CAN71813.1| hypothetical protein VITISV_023418 [Vitis vinifera]
          Length = 672

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = +1

Query: 1   RKGAQQHQATEQKPLGRGHAQHLIGAEVRGKIDGAFDSGLLMTAAVNGRIFRGVLFAPGA 180
           R+  Q HQ  EQKPL       LIGAE+RGK+DGAFDSG LMTA VNG+IFRGVLF+PG 
Sbjct: 503 RQQLQYHQPPEQKPLD------LIGAEIRGKVDGAFDSGYLMTATVNGQIFRGVLFSPGP 556

Query: 181 GVVSNSV 201
            +VS  +
Sbjct: 557 AMVSRGI 563


>ref|XP_004165927.1| PREDICTED: LOW QUALITY PROTEIN: rab9 effector protein with kelch
           motifs-like, partial [Cucumis sativus]
          Length = 606

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +1

Query: 7   GAQQHQATEQKPLGRGHAQHLIGAEVRGKIDGAFDSGLLMTAAVNGRIFRGVLFAP--GA 180
           G Q    TEQ+ L        IG+EVRG++DGAFDSG LMTA VNG+++RGVLF P  G 
Sbjct: 463 GHQNLLKTEQQQLLH------IGSEVRGRVDGAFDSGFLMTATVNGKVYRGVLFTPVSGP 516

Query: 181 GVVSNSVEPNCSPPCLLPSTQVPLMNSNHVDNFRDSQ 291
           GV S +     SPP  LP+  VP  NSNH++  +  Q
Sbjct: 517 GVFSRASIVTESPP--LPTNTVP--NSNHIERSKSLQ 549


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