BLASTX nr result

ID: Glycyrrhiza24_contig00029086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029086
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF30876.1| chloride channel protein [Citrus trifoliata]           178   5e-43
ref|XP_002331119.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   174   7e-42
ref|XP_002447895.1| hypothetical protein SORBIDRAFT_06g017570 [S...   173   1e-41
ref|XP_003581281.1| PREDICTED: chloride channel protein CLC-c-li...   173   1e-41
gb|AFW58337.1| hypothetical protein ZEAMMB73_926410 [Zea mays] g...   171   7e-41

>gb|ADF30876.1| chloride channel protein [Citrus trifoliata]
          Length = 789

 Score =  178 bits (451), Expect = 5e-43
 Identities = 93/139 (66%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
 Frame = -2

Query: 412  RHNGFPVIDEPPFSEAPEXXXXXXXXXXXXXLKHKTFTKQKI--GSFMVNKFKAHDFAKP 239
            RHNGFPVIDEPP + APE             LK K FTKQK   GS ++ +FKAHDFAK 
Sbjct: 636  RHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQKTMAGSDIMRRFKAHDFAKA 695

Query: 238  GSGKGIKLDDLDISQEEMEMYVDLHHITNRSPYTVVETMSLAKAAXXXXXXXXXXXLVVP 59
            GSGKG+KL+DLDI +EEMEM+VDLH ITN SPYTVVETMSLAKAA            VVP
Sbjct: 696  GSGKGVKLEDLDIEEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVP 755

Query: 58   KTPGRPPIVGILTRHDFMP 2
            KTPGRPPIVGILTRHDFMP
Sbjct: 756  KTPGRPPIVGILTRHDFMP 774


>ref|XP_002331119.1| Cl-channel clc-7 [Populus trichocarpa] gi|222872847|gb|EEF09978.1|
            Cl-channel clc-7 [Populus trichocarpa]
          Length = 743

 Score =  174 bits (441), Expect = 7e-42
 Identities = 90/138 (65%), Positives = 101/138 (73%), Gaps = 2/138 (1%)
 Frame = -2

Query: 409  HNGFPVIDEPPFSEAPEXXXXXXXXXXXXXLKHKTFTKQKI--GSFMVNKFKAHDFAKPG 236
            HNGFPVIDEPP S+APE             L+ K FTKQ++  GS ++  FKAHDFAK G
Sbjct: 592  HNGFPVIDEPPCSDAPELCGLVLRSHLLVLLRGKKFTKQRVKTGSGIMKSFKAHDFAKAG 651

Query: 235  SGKGIKLDDLDISQEEMEMYVDLHHITNRSPYTVVETMSLAKAAXXXXXXXXXXXLVVPK 56
            SGKG+KL+DL+I++EEMEMYVDLH ITN SPYTVVETMSLAKAA            VVPK
Sbjct: 652  SGKGVKLEDLEITEEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRELGLRHLCVVPK 711

Query: 55   TPGRPPIVGILTRHDFMP 2
            TPGRPPIVGILTRHDF P
Sbjct: 712  TPGRPPIVGILTRHDFTP 729


>ref|XP_002447895.1| hypothetical protein SORBIDRAFT_06g017570 [Sorghum bicolor]
            gi|241939078|gb|EES12223.1| hypothetical protein
            SORBIDRAFT_06g017570 [Sorghum bicolor]
          Length = 798

 Score =  173 bits (439), Expect = 1e-41
 Identities = 90/139 (64%), Positives = 101/139 (72%), Gaps = 3/139 (2%)
 Frame = -2

Query: 409  HNGFPVIDEPPFSEAPEXXXXXXXXXXXXXLKHKTFTKQKI---GSFMVNKFKAHDFAKP 239
            HNGFPV+DEPP SEAPE             LK K F K+K+   GSF++ +F A DFAKP
Sbjct: 646  HNGFPVVDEPPLSEAPELVGLVLRSHLLVLLKGKGFMKEKMKTSGSFVLQRFGAFDFAKP 705

Query: 238  GSGKGIKLDDLDISQEEMEMYVDLHHITNRSPYTVVETMSLAKAAXXXXXXXXXXXLVVP 59
            GSGKG+K++DLD + EEM+MYVDLH ITN SPYTVVETMSLAKAA           LVVP
Sbjct: 706  GSGKGLKIEDLDFTDEEMDMYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVP 765

Query: 58   KTPGRPPIVGILTRHDFMP 2
            KTPGRPPIVGILTRHDFMP
Sbjct: 766  KTPGRPPIVGILTRHDFMP 784


>ref|XP_003581281.1| PREDICTED: chloride channel protein CLC-c-like [Brachypodium
            distachyon]
          Length = 795

 Score =  173 bits (438), Expect = 1e-41
 Identities = 90/139 (64%), Positives = 100/139 (71%), Gaps = 3/139 (2%)
 Frame = -2

Query: 409  HNGFPVIDEPPFSEAPEXXXXXXXXXXXXXLKHKTFTKQKI---GSFMVNKFKAHDFAKP 239
            HNGFPV+DEPP SEAPE             LK KTF K+K+   GSF++ +F A DFAK 
Sbjct: 643  HNGFPVVDEPPISEAPELVGLVLRSHLLVLLKGKTFMKEKVKTSGSFVLQRFGAFDFAKA 702

Query: 238  GSGKGIKLDDLDISQEEMEMYVDLHHITNRSPYTVVETMSLAKAAXXXXXXXXXXXLVVP 59
            GSGKGIK++DLD + EEMEMYVDLH +TN SPYTVVETMSLAKAA           LVVP
Sbjct: 703  GSGKGIKIEDLDFTDEEMEMYVDLHPVTNTSPYTVVETMSLAKAAVLFRALGLRHLLVVP 762

Query: 58   KTPGRPPIVGILTRHDFMP 2
            KTPGRPPIVGILTRHD MP
Sbjct: 763  KTPGRPPIVGILTRHDLMP 781


>gb|AFW58337.1| hypothetical protein ZEAMMB73_926410 [Zea mays]
            gi|413918406|gb|AFW58338.1| hypothetical protein
            ZEAMMB73_926410 [Zea mays] gi|413918407|gb|AFW58339.1|
            hypothetical protein ZEAMMB73_926410 [Zea mays]
          Length = 795

 Score =  171 bits (432), Expect = 7e-41
 Identities = 88/139 (63%), Positives = 101/139 (72%), Gaps = 3/139 (2%)
 Frame = -2

Query: 409  HNGFPVIDEPPFSEAPEXXXXXXXXXXXXXLKHKTFTKQKI---GSFMVNKFKAHDFAKP 239
            HNGFPV+DEPP SEAPE             LK K F K+K+   GSF++ +F A DFAKP
Sbjct: 643  HNGFPVVDEPPLSEAPELVGLVLRSHLLVLLKGKGFMKEKMKTSGSFVLERFGAFDFAKP 702

Query: 238  GSGKGIKLDDLDISQEEMEMYVDLHHITNRSPYTVVETMSLAKAAXXXXXXXXXXXLVVP 59
            GSGKG+K++DLD + EEM++YVDLH ITN SPYTVVETMSLAKAA           LVVP
Sbjct: 703  GSGKGLKIEDLDFTDEEMDLYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHMLVVP 762

Query: 58   KTPGRPPIVGILTRHDFMP 2
            KTPGRPPIVGILTRHDF+P
Sbjct: 763  KTPGRPPIVGILTRHDFIP 781


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