BLASTX nr result

ID: Glycyrrhiza24_contig00029085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029085
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   184   8e-45
ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synt...   182   2e-44
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   166   2e-39
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   160   8e-38
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   159   2e-37

>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/99 (90%), Positives = 96/99 (96%)
 Frame = -3

Query: 299 FGSGSVPTHLIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPR 120
           FGSGS+PTHLIGAAL RGEWKLAVDMILDPRDGE++AIAKARKYYK+S+DVVGTLKQLPR
Sbjct: 315 FGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPR 374

Query: 119 YLVAERAVLQGLKKSPGNYLQALKSIPRTLRMMYVHSYQ 3
           YLVAERAVLQ LK SPGNYLQALKSIPRTLRM+YVHSYQ
Sbjct: 375 YLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQ 413


>ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
           max]
          Length = 687

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/99 (89%), Positives = 96/99 (96%)
 Frame = -3

Query: 299 FGSGSVPTHLIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPR 120
           FGSGS+PTHLIGAAL +GEWKLAVDMILDPRDGE++AIAKARKYYK+S+DVVGTLKQLPR
Sbjct: 315 FGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPR 374

Query: 119 YLVAERAVLQGLKKSPGNYLQALKSIPRTLRMMYVHSYQ 3
           YLVAERAVLQ LK SPGNYLQALKSIPRTLRM+YVHSYQ
Sbjct: 375 YLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQ 413


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/99 (79%), Positives = 91/99 (91%)
 Frame = -3

Query: 299 FGSGSVPTHLIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPR 120
           FGSGSVPTHLIGAAL RGEW+ AV +ILDPR+GER+AI KAR+YYK+S+D+ GTL+Q PR
Sbjct: 314 FGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFPR 373

Query: 119 YLVAERAVLQGLKKSPGNYLQALKSIPRTLRMMYVHSYQ 3
           +LVAERA+LQ LKK PGNYLQALK+IPRTLRMMYVHSYQ
Sbjct: 374 HLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQ 412


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
           sativus]
          Length = 719

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = -3

Query: 299 FGSGSVPTHLIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPR 120
           FGSGSVPTHL+GA+L RGEWK AV+MILDPR+G+   + +AR YYK+S+D+ GTLKQLPR
Sbjct: 353 FGSGSVPTHLVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLPR 412

Query: 119 YLVAERAVLQGLKKSPGNYLQALKSIPRTLRMMYVHSYQ 3
           YLVAERA+LQ LKK PGNYLQALK+IPRTLRMMYVHSYQ
Sbjct: 413 YLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQ 451


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
           gi|52354299|gb|AAU44470.1| hypothetical protein
           AT3G04820 [Arabidopsis thaliana]
           gi|61742699|gb|AAX55170.1| hypothetical protein
           At3g04820 [Arabidopsis thaliana]
           gi|332640619|gb|AEE74140.1| pseudouridine synthase
           [Arabidopsis thaliana]
          Length = 715

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/99 (76%), Positives = 87/99 (87%)
 Frame = -3

Query: 299 FGSGSVPTHLIGAALFRGEWKLAVDMILDPRDGERNAIAKARKYYKDSNDVVGTLKQLPR 120
           FGSGSVPTH +GAAL +GEWK AVDMILDPR+ ER+ +  AR+YYK++ D+ GTL+QLPR
Sbjct: 352 FGSGSVPTHHVGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPR 411

Query: 119 YLVAERAVLQGLKKSPGNYLQALKSIPRTLRMMYVHSYQ 3
           YLVAERA+LQ LKK PGNYLQALK IPRTLRMMYVHSYQ
Sbjct: 412 YLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQ 450


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