BLASTX nr result

ID: Glycyrrhiza24_contig00029079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029079
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34080.1| unknown [Medicago truncatula]                           82   5e-14
ref|XP_003602310.1| hypothetical protein MTR_3g092050 [Medicago ...    82   5e-14
ref|XP_003523345.1| PREDICTED: UPF0160 protein MYG1, mitochondri...    79   3e-13
ref|XP_003604879.1| hypothetical protein MTR_4g020990, partial [...    64   1e-08
ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondri...    64   1e-08

>gb|AFK34080.1| unknown [Medicago truncatula]
          Length = 234

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/47 (87%), Positives = 42/47 (89%)
 Frame = +2

Query: 113 ILSSSFSTHGAKRVGTHSGTFHCDEALACSMLRLSKHFSNADIVRTR 253
           ILSSSFST  AKRVGTH+GTFHCDEALAC MLRLSK FS ADIVRTR
Sbjct: 12  ILSSSFSTSRAKRVGTHNGTFHCDEALACFMLRLSKLFSGADIVRTR 58


>ref|XP_003602310.1| hypothetical protein MTR_3g092050 [Medicago truncatula]
           gi|355491358|gb|AES72561.1| hypothetical protein
           MTR_3g092050 [Medicago truncatula]
          Length = 345

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/47 (87%), Positives = 42/47 (89%)
 Frame = +2

Query: 113 ILSSSFSTHGAKRVGTHSGTFHCDEALACSMLRLSKHFSNADIVRTR 253
           ILSSSFST  AKRVGTH+GTFHCDEALAC MLRLSK FS ADIVRTR
Sbjct: 12  ILSSSFSTSRAKRVGTHNGTFHCDEALACFMLRLSKLFSGADIVRTR 58


>ref|XP_003523345.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Glycine max]
          Length = 356

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/73 (57%), Positives = 51/73 (69%)
 Frame = +2

Query: 35  MVKVARVCYTYRTFTFHKPLSALGHVILSSSFSTHGAKRVGTHSGTFHCDEALACSMLRL 214
           M+++ R+ + ++ FTF KP   +     SS FST    RVGTH+GTFHCDEALAC MLRL
Sbjct: 1   MIRLVRLWHCHKPFTFPKPQPRMVVEASSSCFST----RVGTHNGTFHCDEALACFMLRL 56

Query: 215 SKHFSNADIVRTR 253
           SK FS A IVRTR
Sbjct: 57  SKRFSAAHIVRTR 69


>ref|XP_003604879.1| hypothetical protein MTR_4g020990, partial [Medicago truncatula]
           gi|355505934|gb|AES87076.1| hypothetical protein
           MTR_4g020990, partial [Medicago truncatula]
          Length = 207

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +2

Query: 119 SSSFSTHGAKRVGTHSGTFHCDEALACSMLRLSKHFSNADIVRTR 253
           SSS S    KRVGTH+G+FHCDEAL C M+RL+++F NA IVRTR
Sbjct: 47  SSSPSHASLKRVGTHNGSFHCDEALGCFMIRLTRNFFNAQIVRTR 91


>ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis
           vinifera]
          Length = 361

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = +2

Query: 59  YTYRTFTFHKPLSA--LGHVILSSSFSTHGAKRVGTHSGTFHCDEALACSMLRLSKHFSN 232
           +T + F F + L+   + H  +S+  +  G KRVGTH+G+FHCDEAL C M+RL+  F +
Sbjct: 8   FTEKLFFFPRYLTLPLMAHSRVSAFSTAPGLKRVGTHNGSFHCDEALGCFMIRLTDKFRD 67

Query: 233 ADIVRTR 253
           A IVRTR
Sbjct: 68  AQIVRTR 74


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