BLASTX nr result

ID: Glycyrrhiza24_contig00029078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029078
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    67   1e-09
emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]    67   1e-09
emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]    65   6e-09

>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Glycine max]
          Length = 684

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   EFLRLHKNLYRSLKVSSTRTEAQSKRLEHVQEFRKWLGID 122
           EFLRLHKNLYRSLK S+TRTEAQSKRLEHVQEFRKW+GID
Sbjct: 645 EFLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFRKWVGID 684


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   EFLRLHKNLYRSLKVSSTRTEAQSKRLEHVQEFRKWLGID 122
           EFL+LHKNLYRSLK S  RTEAQSKRLEHV+ FRKW+GID
Sbjct: 662 EFLKLHKNLYRSLKASEARTEAQSKRLEHVKAFRKWVGID 701


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   EFLRLHKNLYRSLKVSSTRTEAQSKRLEHVQEFRKWLGID 122
           EFL+ HK+LYR+LK S+TRTEAQSKRLE+V+ FRKW GID
Sbjct: 418 EFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 457


>emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]
          Length = 854

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   EFLRLHKNLYRSLKVSSTRTEAQSKRLEHVQEFRKWLGID 122
           EFL+ HK+LYR+LK S+TRTEAQSKRLE+V+ FRKW GID
Sbjct: 815 EFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKWAGID 854


>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   EFLRLHKNLYRSLKVSSTRTEAQSKRLEHVQEFRKWLGID 122
           EFL+ HK+LYR+LK S+TRTEAQSKRLE+V+ FR W GID
Sbjct: 405 EFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRTWAGID 444


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