BLASTX nr result
ID: Glycyrrhiza24_contig00029071
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00029071 (370 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534406.1| PREDICTED: structural maintenance of chromos... 167 8e-40 ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6... 164 5e-39 ref|XP_004146918.1| PREDICTED: structural maintenance of chromos... 161 5e-38 emb|CBI38567.3| unnamed protein product [Vitis vinifera] 161 5e-38 ref|XP_002278113.1| PREDICTED: structural maintenance of chromos... 161 5e-38 >ref|XP_003534406.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Glycine max] Length = 1057 Score = 167 bits (423), Expect = 8e-40 Identities = 82/88 (93%), Positives = 85/88 (96%) Frame = -2 Query: 369 TRGLSGGERSFSTMCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAQGSQ 190 TRGLSGGERSFST+CFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEA GSQ Sbjct: 970 TRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAHGSQ 1029 Query: 189 WIFITPHETSMVKNGDRIKKMQMAAPRS 106 WIFITPH+TS V+ GDRIKKMQMAAPRS Sbjct: 1030 WIFITPHDTSSVRAGDRIKKMQMAAPRS 1057 >ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus communis] gi|223550086|gb|EEF51573.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus communis] Length = 1058 Score = 164 bits (416), Expect = 5e-39 Identities = 81/88 (92%), Positives = 84/88 (95%) Frame = -2 Query: 369 TRGLSGGERSFSTMCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAQGSQ 190 TRGLSGGERSFST+CFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFA AQGSQ Sbjct: 971 TRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1030 Query: 189 WIFITPHETSMVKNGDRIKKMQMAAPRS 106 WIFITPH+ SMVK G+RIKK QMAAPRS Sbjct: 1031 WIFITPHDISMVKQGERIKKQQMAAPRS 1058 >ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Cucumis sativus] Length = 1052 Score = 161 bits (408), Expect = 5e-38 Identities = 79/88 (89%), Positives = 83/88 (94%) Frame = -2 Query: 369 TRGLSGGERSFSTMCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAQGSQ 190 TRGLSGGERSFST+CFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFA AQGSQ Sbjct: 965 TRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQ 1024 Query: 189 WIFITPHETSMVKNGDRIKKMQMAAPRS 106 WIFITPH+ +VK G+RIKK QMAAPRS Sbjct: 1025 WIFITPHDIGVVKQGERIKKQQMAAPRS 1052 >emb|CBI38567.3| unnamed protein product [Vitis vinifera] Length = 1027 Score = 161 bits (408), Expect = 5e-38 Identities = 79/88 (89%), Positives = 84/88 (95%) Frame = -2 Query: 369 TRGLSGGERSFSTMCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAQGSQ 190 TRGLSGGERSFST+CFALALHEMTE+PFRAMDEFDVFMDAVSRKISLDTLV+FA AQGSQ Sbjct: 940 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVNFALAQGSQ 999 Query: 189 WIFITPHETSMVKNGDRIKKMQMAAPRS 106 WIFITPH+ SMVK G+RIKK QMAAPRS Sbjct: 1000 WIFITPHDISMVKQGERIKKQQMAAPRS 1027 >ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like [Vitis vinifera] Length = 1057 Score = 161 bits (408), Expect = 5e-38 Identities = 79/88 (89%), Positives = 84/88 (95%) Frame = -2 Query: 369 TRGLSGGERSFSTMCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAQGSQ 190 TRGLSGGERSFST+CFALALHEMTE+PFRAMDEFDVFMDAVSRKISLDTLV+FA AQGSQ Sbjct: 970 TRGLSGGERSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVNFALAQGSQ 1029 Query: 189 WIFITPHETSMVKNGDRIKKMQMAAPRS 106 WIFITPH+ SMVK G+RIKK QMAAPRS Sbjct: 1030 WIFITPHDISMVKQGERIKKQQMAAPRS 1057