BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029052
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
emb|CBI22025.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-c...    81   1e-13

>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/78 (93%), Positives = 74/78 (94%)
 Frame = -2

Query: 239 SNLLQACIPTKSVSLGKQLHSLILTSGCSSDKFLSNHLLNLYSKFGELQAAVTLFDRMPR 60
           SNLLQACIP KSVSLGKQLHSLI TSGCSSDKF+SNHLLNLYSKFGELQAAV LFDRMPR
Sbjct: 73  SNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPR 132

Query: 59  RNIMSCNIMIKAYLEMGN 6
           RNIMSCNIMIKAYL MGN
Sbjct: 133 RNIMSCNIMIKAYLGMGN 150


>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -2

Query: 239 SNLLQACIPTKSVSLGKQLHSLILTSGCSSDKFLSNHLLNLYSKFGELQAAVTLFDRMPR 60
           S+LLQ+CI   S+SLGKQLHSLI+TSGCSSDKF+SNHLLNLYSK G+L  A+TLF  MPR
Sbjct: 56  SHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPR 115

Query: 59  RNIMSCNIMIKAYLEMGN 6
           +NIMSCNI+I  Y   G+
Sbjct: 116 KNIMSCNILINGYFRSGD 133


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -2

Query: 239 SNLLQACIPTKSVSLGKQLHSLILTSGCSSDKFLSNHLLNLYSKFGELQAAVTLFDRMPR 60
           S+LLQ+CI   S+SLGKQLHSLI+TSGCSSDKF+SNHLLNLYSK G+L  A+TLF  MPR
Sbjct: 56  SHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPR 115

Query: 59  RNIMSCNIMIKAYLEMGN 6
           +NIMSCNI+I  Y   G+
Sbjct: 116 KNIMSCNILINGYFRSGD 133


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/78 (58%), Positives = 62/78 (79%)
 Frame = -2

Query: 239 SNLLQACIPTKSVSLGKQLHSLILTSGCSSDKFLSNHLLNLYSKFGELQAAVTLFDRMPR 60
           S+LLQ+CI   S+  GKQ+HSLI+TSG S DKF+SNHLLN YSK G+ ++++ LF  MPR
Sbjct: 66  SHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPR 125

Query: 59  RNIMSCNIMIKAYLEMGN 6
           RN+MS NI+I  YL++G+
Sbjct: 126 RNVMSFNILINGYLQLGD 143


>sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/75 (46%), Positives = 54/75 (72%)
 Frame = -2

Query: 230 LQACIPTKSVSLGKQLHSLILTSGCSSDKFLSNHLLNLYSKFGELQAAVTLFDRMPRRNI 51
           +Q+C   +S+  GKQLH L++ SG SSDKF+ NHL+++YSK G+  +AV ++ RM ++N 
Sbjct: 51  IQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY 110

Query: 50  MSCNIMIKAYLEMGN 6
           MS NI+I  Y+  G+
Sbjct: 111 MSSNILINGYVRAGD 125