BLASTX nr result

ID: Glycyrrhiza24_contig00029030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029030
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ...   151   1e-34
ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine...   147   2e-33
ref|XP_003536441.1| PREDICTED: uncharacterized protein LOC100819...   104   2e-20
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...    82   1e-13
ref|XP_003536442.1| PREDICTED: uncharacterized protein LOC100819...    72   1e-10

>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
            gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
            factor [Medicago truncatula]
          Length = 1335

 Score =  151 bits (382), Expect = 1e-34
 Identities = 103/240 (42%), Positives = 121/240 (50%), Gaps = 75/240 (31%)
 Frame = +2

Query: 5    VPQKSFGGKMHPKGEDLID------HSKDR------------------------------ 76
            VPQKSF GK H KGEDL+D      H  D                               
Sbjct: 1097 VPQKSFRGKNHQKGEDLMDGSNDRMHESDEDTLISLVKRKKGKNRKESSEQLREQTNEDK 1156

Query: 77   --MNESDDETLISLIERKKEENSKVSSKQLDEQIGGDKLSIDDSDDETLXXXXXXXXXXX 250
               ++SDDE L S++ +KK +N  +SS+QL EQ G DKLS DDSDDE L           
Sbjct: 1157 LSKDDSDDEMLASIL-KKKGKNRNISSEQLQEQTGEDKLSKDDSDDEILGSILKKKVKNR 1215

Query: 251  XXXXEQL------------------------------------HEHANEDKLSRDDSDDE 322
                +QL                                    HE  NED+LSRDDS+DE
Sbjct: 1216 KESRKQLQEQTGEDKLSKDDLDEEILGSILKKKRNGSVSSDYLHESTNEDELSRDDSEDE 1275

Query: 323  MLRSALNENQG-FMNSHQVEYQQVDHELVDSDDEVAVNAFPHNAVSRRKLRMVIDPEDDD 499
            ML+SA NENQG F+NSHQVE  QVD +L DS+DEVAV+  P NAVSRRKLRMV+D EDDD
Sbjct: 1276 MLQSAPNENQGGFVNSHQVENMQVDPDLEDSEDEVAVDTLPDNAVSRRKLRMVVDLEDDD 1335


>ref|XP_003555400.1| PREDICTED: protein timeless homolog [Glycine max]
          Length = 1171

 Score =  147 bits (371), Expect = 2e-33
 Identities = 88/170 (51%), Positives = 112/170 (65%), Gaps = 4/170 (2%)
 Frame = +2

Query: 2    SVPQKSFGGKMHPKGEDLIDHSKDRMNESDDETLISLIERKKEENSKVSSKQLDEQIGGD 181
            S+P KS GGKMHPKG DL+D S +RM+ESDDETL+SL++RKK E+ K+S  QL  Q   D
Sbjct: 1004 SLPLKSSGGKMHPKGADLMDRSNERMDESDDETLVSLVKRKKMESDKLSRGQLHGQTSED 1063

Query: 182  KLSIDDSDDETLXXXXXXXXXXXXXXXE-QLHEHANEDKLSRDDSDDEMLRSALNENQ-- 352
            KLS DDSDDE L               + +L      +++  DDS +  + + ++E +  
Sbjct: 1064 KLSKDDSDDEMLSSVLKRTRRPSLKSKQVELENIQIHERIMGDDSFNGGI-TEVSEGEYR 1122

Query: 353  -GFMNSHQVEYQQVDHELVDSDDEVAVNAFPHNAVSRRKLRMVIDPEDDD 499
               MNS QVEYQQ+D +L D +DEVAV+A P NA SRRKLRMVIDPEDDD
Sbjct: 1123 VDSMNSSQVEYQQMD-DLADLEDEVAVSAVPDNARSRRKLRMVIDPEDDD 1171


>ref|XP_003536441.1| PREDICTED: uncharacterized protein LOC100819261 [Glycine max]
          Length = 162

 Score =  104 bits (260), Expect = 2e-20
 Identities = 74/163 (45%), Positives = 84/163 (51%), Gaps = 40/163 (24%)
 Frame = +2

Query: 131 ENSKVSSKQLDEQIGGDKLSIDDSDDETLXXXXXXXXXXXXXXXEQLHEHANEDKLSRDD 310
           EN K+S  QL  QI  D+LSIDDSDDE L               EQL E  N D LSRDD
Sbjct: 2   ENDKLSRGQLHGQISEDRLSIDDSDDEMLSSVLKEKINSKVST-EQLLEPINVDALSRDD 60

Query: 311 SDDEMLRSALNE----------------------------NQG------------FMNSH 370
           SDDEM  SAL                              N+G             MNS 
Sbjct: 61  SDDEMPSSALKRTRRSSLNSKQVELENIQIQERIMGDDSFNEGKTDALERDNRVDSMNSS 120

Query: 371 QVEYQQVDHELVDSDDEVAVNAFPHNAVSRRKLRMVIDPEDDD 499
           Q+E+QQ+D +L DS+DEVAV+ FP NA SRR+LRMVIDPEDDD
Sbjct: 121 QIEHQQMD-DLADSEDEVAVSGFPDNARSRRQLRMVIDPEDDD 162


>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 43/206 (20%)
 Frame = +2

Query: 11   QKSFGGKMHPKGEDLIDHSKDRMNESDDETLISLIERKKEENSKVSSKQLDEQIGGDKLS 190
            +K   G MH + EDL D    +  +SDDETL+SL +R K+EN ++  +++ EQ    KL 
Sbjct: 1065 RKRAEGNMHLRDEDLNDFDTAKAQDSDDETLLSLRKRSKKENHRLLREEVPEQNIEGKL- 1123

Query: 191  IDDSDDETLXXXXXXXXXXXXXXXEQLHEHAN---------------------------- 286
            +  SDDETL               E+    +N                            
Sbjct: 1124 MQSSDDETLSSVLKKTRRLPPKLDEKRTSTSNGRLGIDDPSGSVVAKDVTKRDGHTLSDE 1183

Query: 287  ------EDKLS------RDDSDDEMLRSALNENQGFMNSHQVE---YQQVDHELVDSDDE 421
                  ED ++       D+S+DE++  +  +  G  +++  +   +QQV  EL DS D+
Sbjct: 1184 LEVAGIEDDVAFKHVSLDDNSEDEIMAFSSEKQLGAASANNRDISPHQQVADELADSGDD 1243

Query: 422  VAVNAFPHNAVSRRKLRMVIDPEDDD 499
            +A +A P N+ SRRKLRMVID EDD+
Sbjct: 1244 IASSALPINSTSRRKLRMVIDFEDDE 1269


>ref|XP_003536442.1| PREDICTED: uncharacterized protein LOC100819799 [Glycine max]
          Length = 68

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
 Frame = +2

Query: 305 DDSDDEMLRSALNENQGF--MNSHQVEYQQVDHELVDSDDEVAVNAFPHNAVSRRKLRMV 478
           DDS +E     L  +     MNS Q+E+QQ+D +L DS+DEVAV+AFP NA SRR+LRMV
Sbjct: 3   DDSFNEGKTDVLERDNRVDSMNSSQIEHQQMD-DLADSEDEVAVSAFPDNARSRRQLRMV 61

Query: 479 IDPEDDD 499
           IDPEDDD
Sbjct: 62  IDPEDDD 68


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