BLASTX nr result

ID: Glycyrrhiza24_contig00029023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029023
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807...   162   2e-38
ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|35549942...   152   3e-35
ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...   135   4e-30
emb|CBI33596.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi...   131   6e-29

>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
          Length = 1402

 Score =  162 bits (411), Expect = 2e-38
 Identities = 86/131 (65%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
 Frame = -2

Query: 382 TQTLEFDSAKLFLAA----RXXXXXXXXXXXXXXXXPHSKLIPNTRFLVDAFRHAGDFSV 215
           +QTL  DS KL+L A    +                PHSKLIP+TRFLVDAFRHAG  S 
Sbjct: 3   SQTL--DSTKLYLTALKTLQSEAPPTPSLPPLPSSIPHSKLIPHTRFLVDAFRHAGPHSH 60

Query: 214 SYFLSHFHSDHYSGLSSSWSRGIIFCSPTTALLLHRVLNIPSPFIHPLPLRQPLKIDGSI 35
           SYFLSHFHSDHYSGLS SWSRG+IFCS TTA LL R+L+IP+ FI PLPLRQPL+IDG+ 
Sbjct: 61  SYFLSHFHSDHYSGLSPSWSRGVIFCSHTTAALLRRILHIPAAFIVPLPLRQPLRIDGAH 120

Query: 34  VTLIDANHCPG 2
           VTL+DANHCPG
Sbjct: 121 VTLLDANHCPG 131


>ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|355499423|gb|AES80626.1| DNA
           ligase [Medicago truncatula]
          Length = 1498

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/94 (74%), Positives = 79/94 (84%)
 Frame = -2

Query: 283 HSKLIPNTRFLVDAFRHAGDFSVSYFLSHFHSDHYSGLSSSWSRGIIFCSPTTALLLHRV 104
           HSKLIPNTRFL+D+FRH    S +YFLSHFHSDHYS LSSSWS GIIFCSP T+ LL  +
Sbjct: 45  HSKLIPNTRFLIDSFRHTTPSSFTYFLSHFHSDHYSPLSSSWSHGIIFCSPITSHLLINI 104

Query: 103 LNIPSPFIHPLPLRQPLKIDGSIVTLIDANHCPG 2
           L+IPSPF+HPL L Q + IDGS+VTLIDANHCPG
Sbjct: 105 LHIPSPFVHPLSLNQSVVIDGSVVTLIDANHCPG 138


>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -2

Query: 280 SKLIPNTRFLVDAFRHAGDFSVSYFLSHFHSDHYSGLSSSWSRGIIFCSPTTALLLHRVL 101
           SKLIP +RF+VD FR +GD+SV+YFLSHFHSDHYSGLS  WS GIIFCS TTA LL  VL
Sbjct: 92  SKLIPKSRFVVDGFRCSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARLLVEVL 151

Query: 100 NIPSPFIHPLPLRQPLKIDGSIVTLIDANHCPG 2
            + S F++PL + QP+ IDG  V L+DANHCPG
Sbjct: 152 GVSSLFVYPLAVSQPVLIDGCEVALLDANHCPG 184


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = -2

Query: 280 SKLIPNTRFLVDAFRHAGDFSVSYFLSHFHSDHYSGLSSSWSRGIIFCSPTTALLLHRVL 101
           SKLIP +RF+VD FR +GD+SV+YFLSHFHSDHYSGLS  WS GIIFCS TTA LL  VL
Sbjct: 49  SKLIPKSRFVVDGFRCSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARLLVEVL 108

Query: 100 NIPSPFIHPLPLRQPLKIDGSIVTLIDANHCPG 2
            + S F++PL + QP+ IDG  V L+DANHCPG
Sbjct: 109 GVSSLFVYPLAVSQPVLIDGCEVALLDANHCPG 141


>ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
           gi|223532518|gb|EEF34307.1| DNA ligase I, putative
           [Ricinus communis]
          Length = 1360

 Score =  131 bits (329), Expect = 6e-29
 Identities = 61/93 (65%), Positives = 76/93 (81%)
 Frame = -2

Query: 280 SKLIPNTRFLVDAFRHAGDFSVSYFLSHFHSDHYSGLSSSWSRGIIFCSPTTALLLHRVL 101
           SK IP TRFL+DAFR +   + +YFL+HFHSDHYSGLSS+WS+G+IFCS  TA L+ R+L
Sbjct: 48  SKHIPKTRFLIDAFRFS-TAAAAYFLTHFHSDHYSGLSSNWSQGMIFCSQITANLVTRIL 106

Query: 100 NIPSPFIHPLPLRQPLKIDGSIVTLIDANHCPG 2
           N+PS F++PLPL   + IDGS +TLIDANHCPG
Sbjct: 107 NVPSQFVYPLPLNDTVIIDGSEITLIDANHCPG 139


Top