BLASTX nr result

ID: Glycyrrhiza24_contig00029014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029014
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protei...   118   4e-25
gb|ACU18449.1| unknown [Glycine max]                                  118   4e-25
ref|XP_003522361.1| PREDICTED: vegetative incompatibility protei...   105   3e-21
ref|XP_003608925.1| WD repeat-containing protein [Medicago trunc...   105   4e-21
ref|XP_003525485.1| PREDICTED: uncharacterized WD repeat-contain...   100   2e-19

>ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protein sel-10-like [Glycine
           max]
          Length = 421

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = -1

Query: 242 HNCLATLKGHTSSYISSLTLSGKFLYTGSSNREIKSWNRAHFHSSSDQQSSTTIVNAGNG 63
           H+CL TLKGHTSSYISSLTLSGKFLYTGSS+REI+SWNR   +SS++  +S T++  GNG
Sbjct: 58  HHCLTTLKGHTSSYISSLTLSGKFLYTGSSDREIRSWNRIPENSSNNNNNSNTVL-TGNG 116

Query: 62  AVKSIVVHSNMLFTAHQDHK 3
           AVKS+V+ SN LF+AHQDHK
Sbjct: 117 AVKSLVIQSNKLFSAHQDHK 136


>gb|ACU18449.1| unknown [Glycine max]
          Length = 284

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = -1

Query: 242 HNCLATLKGHTSSYISSLTLSGKFLYTGSSNREIKSWNRAHFHSSSDQQSSTTIVNAGNG 63
           H+CL TLKGHTSSYISSLTLSGKFLYTGSS+REI+SWNR   +SS++  +S T++  GNG
Sbjct: 58  HHCLTTLKGHTSSYISSLTLSGKFLYTGSSDREIRSWNRIPENSSNNNNNSNTVL-TGNG 116

Query: 62  AVKSIVVHSNMLFTAHQDHK 3
           AVKS+V+ SN LF+AHQDHK
Sbjct: 117 AVKSLVIQSNKLFSAHQDHK 136


>ref|XP_003522361.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Glycine
           max]
          Length = 418

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
 Frame = -1

Query: 242 HNCLATLKGHTSSYISSLTLSGKFLYTGSSNREIKSWNRAHFHSSSD---QQSSTTIVNA 72
           H+CL TLKGHTS YISSLTLSGKFLYTGSS+REI+SWNR   +SS+D     ++ + V A
Sbjct: 56  HHCLTTLKGHTS-YISSLTLSGKFLYTGSSDREIRSWNRIPENSSTDNSNNNNNNSTVLA 114

Query: 71  GNGAVKSIVVHSNMLFTAHQDHK 3
           G GAVKS+V+ SN LF+AHQD+K
Sbjct: 115 GKGAVKSLVIQSNKLFSAHQDNK 137


>ref|XP_003608925.1| WD repeat-containing protein [Medicago truncatula]
           gi|355509980|gb|AES91122.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 401

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = -1

Query: 236 CLATLKGHTSSYISSLTLSGKFLYTGSSNREIKSWNRAHFHSSSDQQSSTTIVNAGNGAV 57
           CL TLK HT  YISSLTL GKFLYTGSSN E+ SWN +H HS   Q  +T  + +GNGAV
Sbjct: 50  CLTTLKFHT--YISSLTLVGKFLYTGSSNTEVTSWNLSHVHSHPQQSINTNTIVSGNGAV 107

Query: 56  KSIVVHSNMLFTAHQDHK 3
           KSIVVHS+ LFTAHQD+K
Sbjct: 108 KSIVVHSDKLFTAHQDNK 125


>ref|XP_003525485.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Glycine max]
          Length = 394

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
 Frame = -1

Query: 242 HNCLATLKGHTSS--YISSLTLSGKFLYTGSSNREIKSWNRAHFHSSSDQQSSTTIVNAG 69
           H+CL TLK HTSS  YIS LTL+G  LYTGSS+REI+SWN  HF       ++  +V AG
Sbjct: 38  HSCLTTLKPHTSSSVYISCLTLAGNLLYTGSSDREIRSWNHTHF-IQKPTTTNNNVVIAG 96

Query: 68  NGAVKSIVVHSNMLFTAHQDHK 3
            GAVKSIVVHS+ LFTAHQD+K
Sbjct: 97  KGAVKSIVVHSDKLFTAHQDNK 118


Top