BLASTX nr result

ID: Glycyrrhiza24_contig00029010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029010
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423...   383   e-104
ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]         380   e-103
ref|XP_003530615.1| PREDICTED: cyclin-D3-1-like [Glycine max]         350   2e-94
ref|XP_003551241.1| PREDICTED: cyclin-D4-1-like [Glycine max]         345   8e-93
ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223...   326   5e-87

>ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423|gb|AES96046.1| Cyclin
           D2 [Medicago truncatula]
          Length = 346

 Score =  383 bits (983), Expect = e-104
 Identities = 199/259 (76%), Positives = 223/259 (86%)
 Frame = +3

Query: 3   RREAIDWIWKAHAYYGFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKM 182
           RREA+DWIWKAHAYYGFGPLS CLSVNYLDRFLSVF+ PRGV+WTVQLLAVAC S+AAKM
Sbjct: 92  RREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKM 151

Query: 183 EESKVPQSVDLQVGEPKFVFEAKTIQKMELLVLGTLRWKMQALTPCSFIDYFLSKITCEK 362
           EE KVPQSVDLQVGEPKFVF+AKTIQ+MEL++L +L WKM+ALTPCSFIDYFL+KI+CEK
Sbjct: 152 EEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEK 211

Query: 363 HPVESSSISRSVQLILCIIRGIDFLEFRPSEIAAAVAIAVLRELQAKELDKAMTDFFIVE 542
           +P + S I+RSVQLIL II+GIDFLEFR SEIAAAVAI+ L+EL  +E+DKA+TDFFIV+
Sbjct: 212 YP-DKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAIS-LKELPTQEVDKAITDFFIVD 269

Query: 543 KERVLKCLELIRDLSLIKACAANLGSNKSAPFVPQSPIGVLDAACISMSSKSDESTVGSY 722
           KERVLKC+ELIRDLSLIK     +G N  A FVPQSPIGVLDA C  MS KSDE T GS 
Sbjct: 270 KERVLKCVELIRDLSLIK-----VGGNNFASFVPQSPIGVLDAGC--MSFKSDELTNGSC 322

Query: 723 TNSSHDSPKTKRSKSDGPS 779
            NSSH SP  KR K DGPS
Sbjct: 323 PNSSHSSPNAKRMKFDGPS 341


>ref|XP_003517706.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 361

 Score =  380 bits (975), Expect = e-103
 Identities = 203/262 (77%), Positives = 225/262 (85%), Gaps = 3/262 (1%)
 Frame = +3

Query: 3   RREAIDWIWKAHAYYGFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKM 182
           RREAIDWI KAH+Y+GFGPLSFCL+VNYLDRFLSVF+LPRGV+WTVQLLAVACLSIAAKM
Sbjct: 100 RREAIDWICKAHSYFGFGPLSFCLAVNYLDRFLSVFDLPRGVTWTVQLLAVACLSIAAKM 159

Query: 183 EESKVPQSVDLQVGEPKFVFEAKTIQKMELLVLGTLRWKMQALTPCSFIDYFLSKITCEK 362
           EE KVPQSVDLQVGEPKFVFEA+TIQKMELLVL TL WKM A+TPCSFIDYFL KITCE+
Sbjct: 160 EEIKVPQSVDLQVGEPKFVFEARTIQKMELLVLSTLGWKMCAITPCSFIDYFLGKITCEQ 219

Query: 363 HPVESSSISRSVQLILCIIRGIDFLEFRPSEIAAAVAIAVLRELQAKELDKAMTDFFIVE 542
           HP + SS+S SVQLIL II GID+LEFRPSEIAAAVA++VL+ELQA E+DKA+ D  +VE
Sbjct: 220 HPAK-SSVSISVQLILGIIMGIDYLEFRPSEIAAAVAVSVLKELQAIEIDKAIIDLLVVE 278

Query: 543 KERVLKCLELIRDLSLIKACAANLGSNKSAPFVPQSPIGVLDAACISMSSKSDESTVGSY 722
           K RVLKC+ELIRDLSLI   AA+LGS    P+VPQSPIGVLDA C+S   KSDE TVGS 
Sbjct: 279 KVRVLKCVELIRDLSLINV-AASLGS--KVPYVPQSPIGVLDAGCLSY--KSDELTVGSC 333

Query: 723 TNSSHDSPK---TKRSKSDGPS 779
            NSSH+      TKRSK DGPS
Sbjct: 334 PNSSHNISNPNPTKRSKPDGPS 355


>ref|XP_003530615.1| PREDICTED: cyclin-D3-1-like [Glycine max]
          Length = 351

 Score =  350 bits (898), Expect = 2e-94
 Identities = 190/257 (73%), Positives = 218/257 (84%), Gaps = 1/257 (0%)
 Frame = +3

Query: 3   RREAIDWIWKAHAYYGFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKM 182
           R+EA+DWIWKAHAY+ FGP S CLSVNYLDRFLSV+ELPRG SW++QLLAVACLSIAAKM
Sbjct: 100 RKEALDWIWKAHAYFDFGPCSLCLSVNYLDRFLSVYELPRGKSWSMQLLAVACLSIAAKM 159

Query: 183 EESKVPQSVDLQVGEPKFVFEAKTIQKMELLVLGTLRWKMQALTPCSFIDYFLSKITCEK 362
           EE KVP  VDLQVGEPKF FEAK IQ+MELLVL TLRWKMQA TP SF+DYFL KITC++
Sbjct: 160 EEIKVPPCVDLQVGEPKFAFEAKDIQRMELLVLSTLRWKMQASTPFSFLDYFLRKITCDQ 219

Query: 363 HPVESSSISRSVQLILCIIRGIDFLEFRPSEIAAAVAIAVLRELQAKELDKAMTDFFIVE 542
             +  SSI RSV  IL II+ I+FLEFRPSEIAAAVAI+V RE+QA+E+DK +T FFIV 
Sbjct: 220 -VIVKSSILRSVGPILNIIKCINFLEFRPSEIAAAVAISVSREMQAEEIDKTLTCFFIVG 278

Query: 543 KERVLKCLELIRDLSLIKACAANLGSNKSAPFVPQSPIGVLDAACISMSSKSDESTVGSY 722
           KER+LKCLELI+DLSLI+  +ANLG+N  A FVPQSPIGVLDAAC  +SS SDE TVGSY
Sbjct: 279 KERILKCLELIKDLSLIQD-SANLGTN-LASFVPQSPIGVLDAAC--LSSISDELTVGSY 334

Query: 723 TNSSHDSPKTK-RSKSD 770
           T+SS ++P +K R KSD
Sbjct: 335 TDSSLNTPNSKRRRKSD 351


>ref|XP_003551241.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 358

 Score =  345 bits (885), Expect = 8e-93
 Identities = 190/265 (71%), Positives = 217/265 (81%), Gaps = 9/265 (3%)
 Frame = +3

Query: 3   RREAIDWIWKAHAYYGFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKM 182
           R EA+DWIWKAHAYYGFGP S CLSVNYLDRFLSV+ELPRG SW++QLLAVACLSIAAKM
Sbjct: 99  RNEALDWIWKAHAYYGFGPCSLCLSVNYLDRFLSVYELPRGKSWSIQLLAVACLSIAAKM 158

Query: 183 EESKVPQSVDLQVGEPKFVFEAKTIQKMELLVLGTLRWKMQALTPCSFIDYFLSKITCEK 362
           EE KVP  VDLQVGEPKFVFEAKTIQ+MELLVL TLRW+MQA TP SF+DYFL KI C++
Sbjct: 159 EEIKVPPFVDLQVGEPKFVFEAKTIQRMELLVLSTLRWQMQASTPFSFLDYFLRKINCDQ 218

Query: 363 HPVESSSISRSVQLILCIIRGIDFLEFRPSEIAAAVAIAVLRELQAKELDKAM------- 521
             +  SSI RSV  IL II+ I+FLEFRPSEIAAAVAI+V RE+QA+E+DKA+       
Sbjct: 219 -VIVKSSIMRSVGPILNIIKCINFLEFRPSEIAAAVAISVSREIQAEEIDKALQMQAEET 277

Query: 522 --TDFFIVEKERVLKCLELIRDLSLIKACAANLGSNKSAPFVPQSPIGVLDAACISMSSK 695
               FFIV KER+LK LELI+DLSL++  +ANLG+N  A FVPQSPIGVLDAAC  +SS 
Sbjct: 278 AAACFFIVGKERILKGLELIKDLSLMQD-SANLGNN-LASFVPQSPIGVLDAAC--LSSI 333

Query: 696 SDESTVGSYTNSSHDSPKTKRSKSD 770
           SDE TVGSY +SS D+P +KR KSD
Sbjct: 334 SDELTVGSYRDSSLDTPNSKRRKSD 358


>ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223529757|gb|EEF31696.1|
           cyclin d, putative [Ricinus communis]
          Length = 366

 Score =  326 bits (835), Expect = 5e-87
 Identities = 176/268 (65%), Positives = 215/268 (80%), Gaps = 7/268 (2%)
 Frame = +3

Query: 3   RREAIDWIWKAHAYYGFGPLSFCLSVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKM 182
           RR+AIDWIWK  A+Y F  LS CLS+NYLDRFLSV++LP+G +WT+QLLAVACLS+AAKM
Sbjct: 98  RRQAIDWIWKVQAHYSFSALSVCLSMNYLDRFLSVYQLPKGKAWTMQLLAVACLSLAAKM 157

Query: 183 EESKVPQSVDLQVGEPKFVFEAKTIQKMELLVLGTLRWKMQALTPCSFIDYFLSKITCEK 362
           EE+ VP SVDLQVGEPKFVFEAKTIQ+MELLVL TL+W+MQ+LTPCSFIDY+L+KI   +
Sbjct: 158 EETNVPLSVDLQVGEPKFVFEAKTIQRMELLVLSTLKWRMQSLTPCSFIDYYLAKIRGNQ 217

Query: 363 HPVESSSISRSVQLILCIIRGIDFLEFRPSEIAAAVAIAVLRELQAKELDKAMTDFFIVE 542
           H + +S ++RS+QLIL II+ IDFLEFRPSEIAAAVAI VL E+QA ++ KAM  F  VE
Sbjct: 218 H-LSTSLVTRSLQLILSIIKCIDFLEFRPSEIAAAVAIFVLGEVQAVDVYKAMPCFTHVE 276

Query: 543 KERVLKCLELIRDLSLIKACAANLG----SNKSAPFVPQSPIGVLDAACISMSSKSDEST 710
           +ERVLKC+ELI+DLSLI   A        +N SA  VPQSP GVL+AAC+S   KSD++T
Sbjct: 277 EERVLKCVELIKDLSLISGSATTSSGDNVANASASSVPQSPNGVLEAACLSY--KSDDTT 334

Query: 711 VGSYTNSSH-DSPKTKRSK--SDGPSMM 785
           VGS  NSSH ++P TKR K  ++ PS +
Sbjct: 335 VGSCANSSHTNTPDTKRRKQTNNNPSQV 362


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