BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00029009
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                    66   4e-14
gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    65   6e-14
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    64   2e-13
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   6e-13
gb|AFK48593.1| unknown [Lotus japonicus]                               62   2e-12

>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score = 65.9 bits (159), Expect(2) = 4e-14
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = -3

Query: 298 DRGVSDLLCYCDSTSAIEAVLHPVPTAHAYAGLLRSIQDRLQRSWRVRLCHTFWEGNKSA 119
           D  V++++CY DS  A+  + +  P  H YA L+++I+D L     + L HT  EGN+ A
Sbjct: 135 DLNVNEIMCYSDSLLAVNLIANDTPRYHIYAALIQNIKD-LLNDRNISLHHTLREGNQCA 193

Query: 118 DWLAKEGVLRQGPLCLVVLPPRELRASLMADELCVMFLR 2
           D+ AK G      L +   PP +L   L AD L + F+R
Sbjct: 194 DFFAKFGANSDAALVVHQSPPADLLPLLRADALGIYFVR 232



 Score = 36.6 bits (83), Expect(2) = 4e-14
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = -2

Query: 440 VLNVDGSCIGNPGRAGFGG 384
           +LNVDGSCIG P R G+GG
Sbjct: 77  ILNVDGSCIGTPPRTGYGG 95


>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 64.7 bits (156), Expect(2) = 6e-14
 Identities = 38/101 (37%), Positives = 51/101 (50%)
 Frame = -3

Query: 304 AWDRGVSDLLCYCDSTSAIEAVLHPVPTAHAYAGLLRSIQDRLQRSWRVRLCHTFWEGNK 125
           AWD G   +    D  SA++ +L    T H +A +L  I+  + R W +   HT  EGN+
Sbjct: 68  AWDLGFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHTLREGNE 127

Query: 124 SADWLAKEGVLRQGPLCLVVLPPRELRASLMADELCVMFLR 2
            ADWLAK        L L V PP +    L+AD  CV+ LR
Sbjct: 128 CADWLAKYDAQSDVSLKLWVSPPPQFAHVLLADASCVLRLR 168



 Score = 37.4 bits (85), Expect(2) = 6e-14
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -2

Query: 437 LNVDGSCIGNPGRAGFGG 384
           +NVDGS  GNPGRAGFGG
Sbjct: 14  INVDGSSFGNPGRAGFGG 31


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 63.9 bits (154), Expect(2) = 2e-13
 Identities = 35/99 (35%), Positives = 55/99 (55%)
 Frame = -3

Query: 298 DRGVSDLLCYCDSTSAIEAVLHPVPTAHAYAGLLRSIQDRLQRSWRVRLCHTFWEGNKSA 119
           D  ++D++CY DS  A+  +++  P  H YA L+++I+D L     + L HT  EGN+ A
Sbjct: 340 DSNMNDVMCYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVR-NITLHHTLREGNQCA 398

Query: 118 DWLAKEGVLRQGPLCLVVLPPRELRASLMADELCVMFLR 2
           D+ AK G      L +   PP +L   L AD +  +F+R
Sbjct: 399 DFFAKLGANSDVHLVVHQSPPADLLPLLRADAIGTVFIR 437



 Score = 36.6 bits (83), Expect(2) = 2e-13
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2

Query: 440 VLNVDGSCIGNPGRAGFGG 384
           +LNVDGSC+G P R G+GG
Sbjct: 282 ILNVDGSCLGTPSRTGYGG 300


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 869

 Score = 57.8 bits (138), Expect(2) = 6e-13
 Identities = 36/101 (35%), Positives = 52/101 (51%)
 Frame = -3

Query: 304  AWDRGVSDLLCYCDSTSAIEAVLHPVPTAHAYAGLLRSIQDRLQRSWRVRLCHTFWEGNK 125
            A D G++D+  Y DS  +I  +       H +A L++ I+D+L       L HT  EGN+
Sbjct: 769  AIDMGITDMAVYSDSLLSINLITTTSSKFHIHAALIQDIRDKLSLR-NFSLNHTLREGNQ 827

Query: 124  SADWLAKEGVLRQGPLCLVVLPPRELRASLMADELCVMFLR 2
            SAD+LAK G +    + +   PP EL   L  D    +FLR
Sbjct: 828  SADYLAKLGAMSDVNVLIHQSPPDELCPLLKNDAAGTLFLR 868



 Score = 40.8 bits (94), Expect(2) = 6e-13
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -2

Query: 443 TVLNVDGSCIGNPGRAGFGG 384
           T+LNVDGSCIG+P RAGFGG
Sbjct: 712 TILNVDGSCIGSPIRAGFGG 731


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 62.4 bits (150), Expect(2) = 2e-12
 Identities = 37/101 (36%), Positives = 48/101 (47%)
 Frame = -3

Query: 304 AWDRGVSDLLCYCDSTSAIEAVLHPVPTAHAYAGLLRSIQDRLQRSWRVRLCHTFWEGNK 125
           AW++G   + C  DS  A+  V     + H YA L+  I+D   R W V L HT  EGN 
Sbjct: 171 AWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDIKDLQSRDWIVELRHTLREGNA 230

Query: 124 SADWLAKEGVLRQGPLCLVVLPPRELRASLMADELCVMFLR 2
            AD L K G  +   L +   P   L   L+AD   V F+R
Sbjct: 231 CADLLVKHGADQNDDLVITENPIAGLGVLLLADARGVSFVR 271



 Score = 34.3 bits (77), Expect(2) = 2e-12
 Identities = 16/24 (66%), Positives = 16/24 (66%)
 Frame = -2

Query: 449 DVTVLNVDGSCIGNPGRAGFGG*F 378
           D  VLNVDGS  G P R GFGG F
Sbjct: 113 DCVVLNVDGSVHGTPQRGGFGGCF 136