BLASTX nr result

ID: Glycyrrhiza24_contig00028975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028975
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicag...   191   4e-47
ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2...   191   5e-47
ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup2...   178   5e-43
ref|XP_004139417.1| PREDICTED: uncharacterized protein LOC101207...   178   5e-43
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...   172   2e-41

>ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicago truncatula]
           gi|355500517|gb|AES81720.1| Nuclear pore complex protein
           Nup205 [Medicago truncatula]
          Length = 2047

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/96 (96%), Positives = 94/96 (97%)
 Frame = -2

Query: 289 KAFRSIGWSTLFECLTIYDEKFKQSFQTAGAMLPEIQEGDAQALVAYLNVLKKVVENGNP 110
           KAFRSIGWSTLFECLTIYDEKFKQS QTAGAMLPEIQEGDA+ALVAYLNVLKKVVENGNP
Sbjct: 620 KAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAKALVAYLNVLKKVVENGNP 679

Query: 109 TERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAT 2
            ERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAT
Sbjct: 680 IERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAT 715


>ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]
          Length = 1931

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/96 (95%), Positives = 94/96 (97%)
 Frame = -2

Query: 289 KAFRSIGWSTLFECLTIYDEKFKQSFQTAGAMLPEIQEGDAQALVAYLNVLKKVVENGNP 110
           KAFRSIGWSTLFECLTIYDEKFKQS QTAGAMLPEIQEGDA+ALVAYLN+LKKVVENGNP
Sbjct: 585 KAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAKALVAYLNILKKVVENGNP 644

Query: 109 TERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAT 2
           TERK WFPDIEPLFKLLSYENVPPYLKGALRNAIAT
Sbjct: 645 TERKTWFPDIEPLFKLLSYENVPPYLKGALRNAIAT 680


>ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup205-like [Cucumis
           sativus]
          Length = 1849

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/96 (85%), Positives = 92/96 (95%)
 Frame = -2

Query: 289 KAFRSIGWSTLFECLTIYDEKFKQSFQTAGAMLPEIQEGDAQALVAYLNVLKKVVENGNP 110
           KAFRS+GW+TLF+CL+IYD+KF+QS QT GA+LPE QEGDA+ALVAYLNVL+KVVENGNP
Sbjct: 515 KAFRSVGWTTLFDCLSIYDDKFRQSLQTVGALLPEFQEGDAKALVAYLNVLQKVVENGNP 574

Query: 109 TERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAT 2
            ERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIA+
Sbjct: 575 VERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAS 610


>ref|XP_004139417.1| PREDICTED: uncharacterized protein LOC101207579 [Cucumis sativus]
          Length = 1920

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/96 (85%), Positives = 92/96 (95%)
 Frame = -2

Query: 289 KAFRSIGWSTLFECLTIYDEKFKQSFQTAGAMLPEIQEGDAQALVAYLNVLKKVVENGNP 110
           KAFRS+GW+TLF+CL+IYD+KF+QS QT GA+LPE QEGDA+ALVAYLNVL+KVVENGNP
Sbjct: 515 KAFRSVGWTTLFDCLSIYDDKFRQSLQTVGALLPEFQEGDAKALVAYLNVLQKVVENGNP 574

Query: 109 TERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAT 2
            ERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIA+
Sbjct: 575 VERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAS 610


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis
           vinifera]
          Length = 1934

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/96 (82%), Positives = 90/96 (93%)
 Frame = -2

Query: 289 KAFRSIGWSTLFECLTIYDEKFKQSFQTAGAMLPEIQEGDAQALVAYLNVLKKVVENGNP 110
           K FRS+GWSTLF+CL+IY+EKFKQ+ Q+ GA+LPE QEGDA+ALVAYLNVL+KV++NGNP
Sbjct: 579 KTFRSVGWSTLFDCLSIYEEKFKQALQSPGAILPEFQEGDAKALVAYLNVLQKVMQNGNP 638

Query: 109 TERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAT 2
            ERKNWFPDIEPLFKLLSYENVPPYLKGALRNAI T
Sbjct: 639 VERKNWFPDIEPLFKLLSYENVPPYLKGALRNAITT 674


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