BLASTX nr result

ID: Glycyrrhiza24_contig00028967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028967
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]   103   2e-20
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]   101   7e-20
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    100   1e-19
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   100   1e-19
emb|CAN68578.1| hypothetical protein VITISV_019283 [Vitis vinifera]   100   2e-19

>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
          Length = 569

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = -1

Query: 292 IYSDNIGATYLCANPVFHFRMKHLAIDYHFVRDLVAENKLTVSHVPTSHQLADLLTKPLS 113
           IY DN+GAT+LC+NPVFH RMKH+A+DYHF+R+ V    L VSH+  S QLAD LTKPL+
Sbjct: 480 IYCDNVGATHLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPLA 539

Query: 112 ASRHKFLKDKIGVIEDASILRG 47
             +   LK KIG+    SILRG
Sbjct: 540 RPQFNSLKAKIGLAPRPSILRG 561


>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/82 (59%), Positives = 59/82 (71%)
 Frame = -1

Query: 292 IYSDNIGATYLCANPVFHFRMKHLAIDYHFVRDLVAENKLTVSHVPTSHQLADLLTKPLS 113
           IY DN+GAT LC+NPVFH RMKH+A+DYHF+R+ V    L VSH+  S QLAD LTKPL+
Sbjct: 389 IYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPLA 448

Query: 112 ASRHKFLKDKIGVIEDASILRG 47
             +   LK KIG+    SILRG
Sbjct: 449 RPQFDSLKAKIGLAPRPSILRG 470


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  100 bits (250), Expect = 1e-19
 Identities = 50/75 (66%), Positives = 53/75 (70%)
 Frame = -1

Query: 292  IYSDNIGATYLCANPVFHFRMKHLAIDYHFVRDLVAENKLTVSHVPTSHQLADLLTKPLS 113
            IY DNIGATYLCANPVFH RMKH+A+DYHFVR  +    L VSHV T  QLAD LTKPL 
Sbjct: 1351 IYCDNIGATYLCANPVFHSRMKHVALDYHFVRGYIQSGALRVSHVSTKDQLADALTKPLP 1410

Query: 112  ASRHKFLKDKIGVIE 68
              R   L  KIGV E
Sbjct: 1411 RPRFTELNSKIGVQE 1425


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = -1

Query: 292  IYSDNIGATYLCANPVFHFRMKHLAIDYHFVRDLVAENKLTVSHVPTSHQLADLLTKPLS 113
            I+ DNIGATYLCANPVFH RMKH+AIDYHFVR+++    L VSHV T  QLAD LTKPLS
Sbjct: 1396 IFCDNIGATYLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVSHVSTRDQLADALTKPLS 1455

Query: 112  ASRHKFLKDKIGV 74
             +  +  + KIGV
Sbjct: 1456 RAHFQSARFKIGV 1468


>emb|CAN68578.1| hypothetical protein VITISV_019283 [Vitis vinifera]
          Length = 472

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = -1

Query: 292 IYSDNIGATYLCANPVFHFRMKHLAIDYHFVRDLVAENKLTVSHVPTSHQLADLLTKPLS 113
           IY DN+GATY+C NPVFH  MKH+AID+HFVRD V++  L VSH+ TS QLAD LTKPL 
Sbjct: 385 IYYDNVGATYVCVNPVFHSCMKHIAIDFHFVRDQVSKKLLHVSHIHTSDQLADSLTKPLP 444

Query: 112 ASRHKFLKDKIGVIEDASILRG 47
             +    + KIG+ +  SILRG
Sbjct: 445 HLQFLNHRSKIGIQDGGSILRG 466


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