BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028966
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    84   1e-14
ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          74   8e-12
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    66   3e-09
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   8e-08

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   KIHGLQLPSGEWCTEPTILQEEVVSFFKDLFCTKEVVRNSIYLPNICP-LSDAGKNALTQ 178
           KIH LQLP+G   ++  ILQEE + +FK  FC  ++  +  +     P L D GK +LT 
Sbjct: 370 KIHKLQLPNGISTSDSNILQEEALKYFKKFFCGSQIPYSRFFNEGRHPALDDTGKTSLTS 429

Query: 179 SVTKAEVHRALMSMKSYKALGPDGFQPIFYKMF 277
            +TK EV  AL SMK YKA GPDGF  IF+K +
Sbjct: 430 PITKKEVFAALNSMKPYKAPGPDGFHCIFFKQY 462


>ref|XP_002298855.1| predicted protein [Populus trichocarpa] gi|222846113|gb|EEE83660.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   KIHGLQLPSGEWCTEPTILQEEVVSFFKDLFCTKEVVR-NSIYLPNICPLSDAGKNALTQ 178
           KI GL LP G WC+E   LQ E V+F+K LF   + +  N+     I  LS  G + L +
Sbjct: 464 KICGLFLPDGSWCSEDNTLQVEAVNFYKSLFYYNDTIELNAFEGVTIPKLSSEGVSELAK 523

Query: 179 SVTKAEVHRALMSMKSYKALGPDGFQPIFYKMF 277
           SVTK EV  ALMSM SYKA G DGF  +F+K +
Sbjct: 524 SVTKEEVDIALMSMGSYKAPGKDGFHALFFKTY 556


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 73.9 bits (180), Expect(2) = 8e-12
 Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
 Frame = +2

Query: 2    KIHGLQLPSGEWCTEPTILQEEVVSFFKDLFCTKEVV----RNSIYLPNICPLSDAGKNA 169
            KIHGL L  G W T+P +L +E  SF+K LFC  + V       + LP+   L++   N 
Sbjct: 770  KIHGLFLKDGVWETDPEVLSQEAESFYKSLFCHLDDVDLGCLGDVPLPS---LNEKACNN 826

Query: 170  LTQSVTKAEVHRALMSMKSYKALGPDGFQPIFYKMF 277
            LT  VT  EV  A+  M S+KA GPDGFQ  F+K +
Sbjct: 827  LTAPVTMEEVKAAVFHMNSFKAPGPDGFQAFFFKEY 862



 Score = 20.8 bits (42), Expect(2) = 8e-12
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 276 FWEDVGDDVW 305
           +WE +G DVW
Sbjct: 862 YWEIIGLDVW 871


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   KIHGLQLPSGEWCTEPTILQEEVVSFFKDLFCTKEV--VRNSIYLPNICPLSDAGKNALT 175
           +I  L+     W T+   L+   ++++K L+  ++V  VRN +       +S+A K AL 
Sbjct: 230 RIESLKGDDDRWVTDKVELEAMALTYYKRLYSLEDVSEVRNMLPTGGFASISEAEKAALL 289

Query: 176 QSVTKAEVHRALMSMKSYKALGPDGFQPIFYK 271
           Q+ TKAEV  A+ SM  +KA GPDG+QP+FY+
Sbjct: 290 QAFTKAEVVSAVKSMGRFKAPGPDGYQPVFYQ 321


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
 Frame = +2

Query: 2   KIHGLQLPSGEWCTEPTILQEEVVSFFKDLFCTKEVVRNSIYLP-NICPLSDAGK-NALT 175
           +I  LQ   GEW + P  ++  V+ ++K LF    V  N  +LP +  P   A     + 
Sbjct: 373 RIDMLQNNDGEWISNPMEVKAMVLGYWKHLFSEDSVQSNFCHLPRDFFPQITADDFEKMM 432

Query: 176 QSVTKAEVHRALMSMKSYKALGPDGFQPIFYKMF 277
           + +++ EV  AL SMK +KA GPDGFQP+FY+ F
Sbjct: 433 RPLSEVEVTLALKSMKPFKAPGPDGFQPLFYQRF 466