BLASTX nr result

ID: Glycyrrhiza24_contig00028961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028961
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541373.1| PREDICTED: ABC transporter C family member 5...   114   8e-24
emb|CBX25011.3| multidrug resistance-associated protein 2, parti...   100   2e-19
ref|XP_002526533.1| multidrug resistance-associated protein 2, 6...    99   3e-19
ref|XP_002321297.1| multidrug resistance protein ABC transporter...    97   1e-18
ref|XP_003554305.1| PREDICTED: ABC transporter C family member 5...    97   2e-18

>ref|XP_003541373.1| PREDICTED: ABC transporter C family member 5-like [Glycine max]
          Length = 1517

 Score =  114 bits (285), Expect = 8e-24
 Identities = 69/130 (53%), Positives = 78/130 (60%), Gaps = 14/130 (10%)
 Frame = -3

Query: 348 VLELSAICXXXXXXXXXXXXXXVRKILVYKG-IRIGNAIIDGVETSECDV--------RV 196
           VLEL+ IC              VR++LVY G  R G     G  +  C V        R+
Sbjct: 15  VLELATICMNLTFVLLFLFVVSVRRVLVYGGGFRFGKDGNSGNASPICSVIDEETRGVRI 74

Query: 195 GAGFKCSVLCCFYVLFVQVLVLGFDGVALIWGEVE-----DWSLLSVPASQGLAWFVLSF 31
           G GFK SVL CFYVLFV VL LGF+G ALIWGE       D SLL+VPA+QGLAWFVLSF
Sbjct: 75  GVGFKLSVLSCFYVLFVNVLALGFEGGALIWGEANGDADVDLSLLAVPAAQGLAWFVLSF 134

Query: 30  SAVYCKFKGS 1
           SA+YCKFK S
Sbjct: 135 SALYCKFKVS 144


>emb|CBX25011.3| multidrug resistance-associated protein 2, partial [Phaseolus
           vulgaris]
          Length = 1513

 Score =  100 bits (248), Expect = 2e-19
 Identities = 63/126 (50%), Positives = 75/126 (59%), Gaps = 10/126 (7%)
 Frame = -3

Query: 348 VLELSAICXXXXXXXXXXXXXXVRKILVYKG-IRIG--------NAIIDGVETSECDVRV 196
           VLEL+ IC              VR+ LVY+G  R G        + I   ++     VR+
Sbjct: 15  VLELATICVNLTLVLLFLFVVSVRRALVYQGGFRFGKNGNSGNASPICSVIDEERRGVRI 74

Query: 195 GAGFKCSVLCCFYVLFVQVLVLGFDGVALIWGEVE-DWSLLSVPASQGLAWFVLSFSAVY 19
           G  FK SV+ CFYVLFV VL LGF+G ALIWGE + D SLLSVPA+Q LAWFVLSF  + 
Sbjct: 75  GLVFKLSVVSCFYVLFVHVLALGFEGGALIWGEDDVDLSLLSVPAAQCLAWFVLSFWTLD 134

Query: 18  CKFKGS 1
           CKFK S
Sbjct: 135 CKFKVS 140


>ref|XP_002526533.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223534094|gb|EEF35811.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1504

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 16/132 (12%)
 Frame = -3

Query: 348 VLELSAICXXXXXXXXXXXXXXVRKILVYKG-IRI-----GNAIIDGVETSECD------ 205
           VL+L++IC               R+I V  G +R+       A    +  S  D      
Sbjct: 29  VLQLASICINLTLFLVFLFIVSARQIFVCVGRVRLLKDDHSAANSSPIRRSSADGEIPVV 88

Query: 204 VRVGAGFKCSVLCCFYVLFVQVLVLGFDGVALIW----GEVEDWSLLSVPASQGLAWFVL 37
           + +  GFK  ++CCFYVLF+Q LVLGFDG+ALI     G+V DWS++ +PA+QGLAWFVL
Sbjct: 89  ITISTGFKLVLVCCFYVLFLQFLVLGFDGIALIREAVNGKVVDWSIICLPAAQGLAWFVL 148

Query: 36  SFSAVYCKFKGS 1
           SFSA++CKFK S
Sbjct: 149 SFSALHCKFKAS 160


>ref|XP_002321297.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222862070|gb|EEE99612.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1513

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 59/119 (49%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
 Frame = -3

Query: 345 LELSAICXXXXXXXXXXXXXXVRKILVYKGIRIGNAIIDGVETSECDVRVGAGFKCSVLC 166
           LEL++IC               R+I V  G RI  + IDG      DV +G GFK  +  
Sbjct: 28  LELASICVNLTLFIVFLFISSARQIFVCVG-RIRMSSIDG---DIRDVIIGTGFKLCLFG 83

Query: 165 CFYVLFVQVLVLGFDGVALIW----GEVEDWSLLSVPASQGLAWFVLSFSAVYCKFKGS 1
           CFYVL +Q LVLGFDGVALI     G+  DWS++ +PA+QGLAWFVLSFS ++CKFK S
Sbjct: 84  CFYVLLLQFLVLGFDGVALIKEAVNGKDVDWSVICLPAAQGLAWFVLSFSVLHCKFKPS 142


>ref|XP_003554305.1| PREDICTED: ABC transporter C family member 5-like [Glycine max]
          Length = 1537

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 63/128 (49%), Positives = 72/128 (56%), Gaps = 14/128 (10%)
 Frame = -3

Query: 348 VLELSAICXXXXXXXXXXXXXXVRKILV--YKGIRIGNAIIDGVETSEC--------DVR 199
           +LEL AIC               RK+LV  + G+R G     G  +  C        D+R
Sbjct: 34  LLELVAICANLTLFILFLVVVSARKVLVCVWGGVRFGKENGTGNASPGCVSVDLETRDIR 93

Query: 198 VGAGFKCSVLCCFYVLFVQVLVLGFDGVALIWGEVED----WSLLSVPASQGLAWFVLSF 31
           +   FK SVL CFYVL VQVLVLGFDGVALI G   D     +LLSVP  QGLAW VLSF
Sbjct: 94  IETWFKLSVLSCFYVLLVQVLVLGFDGVALIRGRDLDLDLGLALLSVPLVQGLAWVVLSF 153

Query: 30  SAVYCKFK 7
           SA+ CKFK
Sbjct: 154 SALQCKFK 161


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