BLASTX nr result

ID: Glycyrrhiza24_contig00028944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028944
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protei...    78   7e-13
gb|ACU18449.1| unknown [Glycine max]                                   78   7e-13
ref|XP_003522361.1| PREDICTED: vegetative incompatibility protei...    73   2e-11
ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain...    72   5e-11
emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]    72   5e-11

>ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protein sel-10-like [Glycine
           max]
          Length = 421

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/74 (60%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
 Frame = -2

Query: 210 QPGSTN--SFTSQRSLASVPSLNNTSKSHP--STTYHHCLTTLKGHNXXXXXXXXXXSGK 43
           Q GST   S +SQRSL SVPSLN+    H   ST YHHCLTTLKGH            GK
Sbjct: 22  QQGSTTPKSLSSQRSLVSVPSLNHHHHLHTPNSTVYHHCLTTLKGHTSSYISSLTLS-GK 80

Query: 42  FLYTGSSDKEIRSW 1
           FLYTGSSD+EIRSW
Sbjct: 81  FLYTGSSDREIRSW 94


>gb|ACU18449.1| unknown [Glycine max]
          Length = 284

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/74 (60%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
 Frame = -2

Query: 210 QPGSTN--SFTSQRSLASVPSLNNTSKSHP--STTYHHCLTTLKGHNXXXXXXXXXXSGK 43
           Q GST   S +SQRSL SVPSLN+    H   ST YHHCLTTLKGH            GK
Sbjct: 22  QQGSTTPKSLSSQRSLVSVPSLNHHHHLHTPNSTVYHHCLTTLKGHTSSYISSLTLS-GK 80

Query: 42  FLYTGSSDKEIRSW 1
           FLYTGSSD+EIRSW
Sbjct: 81  FLYTGSSDREIRSW 94


>ref|XP_003522361.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Glycine
           max]
          Length = 418

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/73 (57%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
 Frame = -2

Query: 213 QQPGSTNSFTS-QRSLASVPSLNNTSKSHPS-TTYHHCLTTLKGHNXXXXXXXXXXSGKF 40
           QQ  +T S +S QRSL SVPSLN+     P+ + YHHCLTTLKGH            GKF
Sbjct: 21  QQGSTTKSLSSSQRSLISVPSLNHHHLHTPNPSVYHHCLTTLKGHTSYISSLTLS--GKF 78

Query: 39  LYTGSSDKEIRSW 1
           LYTGSSD+EIRSW
Sbjct: 79  LYTGSSDREIRSW 91


>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 427

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
 Frame = -2

Query: 201 STNSFTSQRSLASVPSLNNTSKSHPS--TTYHHCLTTLKGHNXXXXXXXXXXSGKFLYTG 28
           S+NS  SQ SL SVPSL + S+ H    TT+HHC++TLKGH+           GKFLY+G
Sbjct: 44  SSNSLASQPSLPSVPSLTSQSRRHEQAITTHHHCISTLKGHSSYVFSLALA--GKFLYSG 101

Query: 27  SSDKEIRSW 1
           SSDKEIR W
Sbjct: 102 SSDKEIRIW 110


>emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]
          Length = 507

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
 Frame = -2

Query: 201 STNSFTSQRSLASVPSLNNTSKSHPS--TTYHHCLTTLKGHNXXXXXXXXXXSGKFLYTG 28
           S+NS  SQ SL SVPSL + S+ H    TT+HHC++TLKGH+           GKFLY+G
Sbjct: 124 SSNSLASQPSLPSVPSLTSQSRRHEQXITTHHHCISTLKGHSSYVFSLALA--GKFLYSG 181

Query: 27  SSDKEIRSW 1
           SSDKEIR W
Sbjct: 182 SSDKEIRIW 190


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