BLASTX nr result

ID: Glycyrrhiza24_contig00028931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028931
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japo...    85   5e-15
ref|XP_002519485.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japonicus]
          Length = 224

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
 Frame = -2

Query: 300 ANPIFQAQESFNIGPTQKCQFKDSNISNFVLGGEAIXXXXXXXXXXXNQVSHVIEQELGD 121
           +N  FQAQESF I P QK QF+ S+ ++FV GGE             N+ SHV E +LG 
Sbjct: 81  SNSFFQAQESF-IHPPQKFQFQFSS-NSFVFGGETTSCSSSSDGSCNNKTSHVTEPDLGY 138

Query: 120 H-----ASFVEQIGAVNYLYNG----EKLMLSNSGSADGWTEKQNGLW 4
                 ++F+EQIG V+YLYNG    +KLM +N     GWTEKQNGLW
Sbjct: 139 GEGCVGSTFMEQIGGVDYLYNGVEDTQKLMFNNGDGVSGWTEKQNGLW 186


>ref|XP_002519485.1| conserved hypothetical protein [Ricinus communis]
           gi|223541348|gb|EEF42899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 198

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = -2

Query: 291 IFQAQESFNIGPTQKCQFKDSNISNFVLGGEAIXXXXXXXXXXXNQVSHVIEQELGDHAS 112
           + Q +ESF +GP Q CQ KDS+ +  V GGEA            NQ+SH   +ELG    
Sbjct: 86  MLQNKESF-MGPLQHCQVKDSS-NLLVFGGEA--SCSSSDGSWNNQISHA--KELG---- 135

Query: 111 FVEQIGAVNYLYNG-EKLMLSNSGSADGWTEKQNGLW 4
             +Q G  +Y Y+G E    S  G  DGW+EK NGLW
Sbjct: 136 -YDQYGGASYSYHGVEGSQKSMGGGGDGWSEKPNGLW 171


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