BLASTX nr result

ID: Glycyrrhiza24_contig00028910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028910
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   143   2e-32
ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [M...   142   4e-32
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   138   5e-31
ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinu...   112   4e-23
ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helica...   110   9e-23

>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1180

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/87 (78%), Positives = 75/87 (86%)
 Frame = +2

Query: 5   NIPANEGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEGQKMLEFRRSLPAFK 184
           +IPANE +YEQPEP T+NSVVKEKIL+R+SLQLHHQQ+DWQESPEGQKMLEFRRSLPAFK
Sbjct: 227 SIPANERMYEQPEPVTHNSVVKEKILQRKSLQLHHQQQDWQESPEGQKMLEFRRSLPAFK 286

Query: 185 EKDAFLKXXXXXXXXXXSGETGCGKTT 265
           EKDAFL+          SGETGCGKTT
Sbjct: 287 EKDAFLRVISQSQVVVVSGETGCGKTT 313


>ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 1214

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/88 (77%), Positives = 74/88 (84%)
 Frame = +2

Query: 2   GNIPANEGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEGQKMLEFRRSLPAF 181
           G+IPA+EGIY  PEP ++NSV KEKIL+RRSLQLHHQQ+DWQESPEGQKMLEFRRSLPAF
Sbjct: 259 GSIPADEGIYGHPEPMSHNSVAKEKILQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAF 318

Query: 182 KEKDAFLKXXXXXXXXXXSGETGCGKTT 265
           KEKDAFLK          SGETGCGKTT
Sbjct: 319 KEKDAFLKVVSENQVIVVSGETGCGKTT 346


>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1177

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/87 (77%), Positives = 73/87 (83%)
 Frame = +2

Query: 5   NIPANEGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEGQKMLEFRRSLPAFK 184
           +IPANEG+YEQPEP T+NSVVKEKIL R+SLQL H+Q DWQESPEGQKMLEFRRSLPAFK
Sbjct: 224 SIPANEGMYEQPEPMTHNSVVKEKILDRKSLQLLHRQHDWQESPEGQKMLEFRRSLPAFK 283

Query: 185 EKDAFLKXXXXXXXXXXSGETGCGKTT 265
           EKDAFL+          SGETGCGKTT
Sbjct: 284 EKDAFLRVISQNQVVVVSGETGCGKTT 310


>ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1058

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/82 (63%), Positives = 64/82 (78%)
 Frame = +2

Query: 20  EGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEGQKMLEFRRSLPAFKEKDAF 199
           EG+YEQP+P   N+VV E+ILRR+SLQL  +Q++WQE+PEGQKM EFR+SLPA+KE+DA 
Sbjct: 149 EGVYEQPDPMIKNNVVMERILRRKSLQLQTKQQEWQETPEGQKMAEFRQSLPAYKERDAL 208

Query: 200 LKXXXXXXXXXXSGETGCGKTT 265
           LK          SGETGCGKTT
Sbjct: 209 LKAISENQVVVVSGETGCGKTT 230


>ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1231

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/87 (60%), Positives = 65/87 (74%)
 Frame = +2

Query: 5   NIPANEGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEGQKMLEFRRSLPAFK 184
           N   N G+++  EP+T  SVV EKILRR+SLQL +QQ++WQES EGQKM+EFR+SLPAFK
Sbjct: 256 NCANNNGLFQHQEPSTTQSVVMEKILRRKSLQLRYQQQEWQESLEGQKMIEFRKSLPAFK 315

Query: 185 EKDAFLKXXXXXXXXXXSGETGCGKTT 265
           E++A LK          SGETGCGKTT
Sbjct: 316 EREALLKAISENQVVVVSGETGCGKTT 342