BLASTX nr result

ID: Glycyrrhiza24_contig00028874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028874
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545506.1| PREDICTED: cyclin-A2-2-like [Glycine max]         148   4e-34
ref|XP_003550156.1| PREDICTED: cyclin-A2-2-like [Glycine max]         144   1e-32
ref|NP_001237783.1| mitotic cyclin a2-type [Glycine max] gi|8573...   137   1e-30
ref|XP_003526434.1| PREDICTED: cyclin-A2-2-like [Glycine max]         135   3e-30
ref|XP_003588683.1| Cyclin [Medicago truncatula] gi|355477731|gb...   128   6e-28

>ref|XP_003545506.1| PREDICTED: cyclin-A2-2-like [Glycine max]
          Length = 470

 Score =  148 bits (374), Expect = 4e-34
 Identities = 89/154 (57%), Positives = 104/154 (67%), Gaps = 19/154 (12%)
 Frame = +1

Query: 16  QTRGGYKKRNTKEASDHVSIQVLSTQEDV------------------GTTEESRDRELLQ 141
           Q RGGYKK NTK  S +VSIQVLSTQEDV                     E   D EL+Q
Sbjct: 64  QARGGYKKTNTK-GSSNVSIQVLSTQEDVRAELAKDLSTISMVQTHDAIVERPEDTELVQ 122

Query: 142 PCTSNSTRERVIEAPLLSMQDSVMSDELLSSPNKDINMICGKLRASDGLGIVDIDS-ELK 318
           P  S      V+  PLLSMQ+S+ SDE+LS PNKDI+MI  KL+ S+ LGIVDIDS ELK
Sbjct: 123 PSMS------VMAGPLLSMQNSMKSDEILSPPNKDIDMITEKLKLSERLGIVDIDSVELK 176

Query: 319 DPLVWSSYAPDIYHSIRVRECERRPLANYIEKLQ 420
           DP VWSSYAPDIY++I VRE ERRPL++Y++KLQ
Sbjct: 177 DPQVWSSYAPDIYNNIFVREFERRPLSDYMDKLQ 210


>ref|XP_003550156.1| PREDICTED: cyclin-A2-2-like [Glycine max]
          Length = 458

 Score =  144 bits (362), Expect = 1e-32
 Identities = 90/160 (56%), Positives = 104/160 (65%), Gaps = 21/160 (13%)
 Frame = +1

Query: 4   TSNFQTRGGYKKRNTKEASDHVSIQVLSTQEDV-------------------GTTEESRD 126
           TS  Q RGGYKK NTK AS+ VSIQVLSTQEDV                      E    
Sbjct: 67  TSKSQARGGYKKTNTKGASN-VSIQVLSTQEDVRAKLAKDLPSISMVQSHDANVAERQEG 125

Query: 127 RELLQPCTSNSTRERVIEAPLLSMQDSVMSDELLSSPNKDINM-ICGKLRASDGLGIVDI 303
            E++QP  S      V+  PLLSMQDS+ SDE+L SPNKD++M I  KL+ SDGL IVDI
Sbjct: 126 TEVVQPSMS------VMAGPLLSMQDSMKSDEILRSPNKDVDMMITEKLKLSDGLDIVDI 179

Query: 304 DS-ELKDPLVWSSYAPDIYHSIRVRECERRPLANYIEKLQ 420
           DS ELKDP VWSSYAPDIY+SI VRE ERRP ++Y++ LQ
Sbjct: 180 DSVELKDPQVWSSYAPDIYNSIFVREFERRPSSDYMDMLQ 219


>ref|NP_001237783.1| mitotic cyclin a2-type [Glycine max] gi|857395|dbj|BAA09465.1|
           mitotic cyclin a2-type [Glycine max]
          Length = 469

 Score =  137 bits (344), Expect = 1e-30
 Identities = 77/141 (54%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   KTSNFQTRGGYKKRNTKEASDHVSIQVLSTQEDVGTTEESRDRELLQPCTSNST-RERVI 177
           K S FQ +G   K+NTK A+  VS  V S+ +DV   + + +   ++   SN T RE V 
Sbjct: 91  KASKFQAKGVCTKKNTKLAASSVSTDVSSSHDDV-RAKLAEELSTIKMVESNDTLREGVT 149

Query: 178 EAPLLSMQDSVMSDELLSSPNKDINMICGKLRASDGLGIVDIDSELKDPLVWSSYAPDIY 357
               LSMQ+SV SDEL +SPNKDI++IC KL ASD L IVDIDSELKDP +WS YAPDIY
Sbjct: 150 ADTSLSMQNSVKSDELRNSPNKDIDIICEKLGASDSLTIVDIDSELKDPQLWSFYAPDIY 209

Query: 358 HSIRVRECERRPLANYIEKLQ 420
            +IRV E +R+PL NY++KLQ
Sbjct: 210 SNIRVTELQRKPLTNYMDKLQ 230


>ref|XP_003526434.1| PREDICTED: cyclin-A2-2-like [Glycine max]
          Length = 469

 Score =  135 bits (340), Expect = 3e-30
 Identities = 76/140 (54%), Positives = 96/140 (68%)
 Frame = +1

Query: 1   KTSNFQTRGGYKKRNTKEASDHVSIQVLSTQEDVGTTEESRDRELLQPCTSNSTRERVIE 180
           K+S FQ +G Y K+ TK A+  VS +V STQE+V          +    + ++ RE V  
Sbjct: 91  KSSKFQAKGVYTKKTTKLAALGVSTEVSSTQENVRAKLAEELSTIRMVESKDTIREGVTA 150

Query: 181 APLLSMQDSVMSDELLSSPNKDINMICGKLRASDGLGIVDIDSELKDPLVWSSYAPDIYH 360
              LSMQ+S+ SDEL SSPNKDI+MI  KL ASD L IVDIDSELKD  VWSSYAPDIY 
Sbjct: 151 DTALSMQNSLKSDELQSSPNKDIHMIWEKLGASDSLTIVDIDSELKDSQVWSSYAPDIYS 210

Query: 361 SIRVRECERRPLANYIEKLQ 420
           +I+V E +R+P+ANY++KLQ
Sbjct: 211 NIQVTELQRKPVANYMDKLQ 230


>ref|XP_003588683.1| Cyclin [Medicago truncatula] gi|355477731|gb|AES58934.1| Cyclin
           [Medicago truncatula]
          Length = 480

 Score =  128 bits (321), Expect = 6e-28
 Identities = 76/141 (53%), Positives = 95/141 (67%), Gaps = 2/141 (1%)
 Frame = +1

Query: 4   TSNFQTRGGYKKRNTKEAS-DHVSIQVLSTQEDVGTTEESRDRELLQPCTSNSTR-ERVI 177
           TSNFQ + G KKR T  AS D VS+QV + +ED    E ++D          S + +  +
Sbjct: 49  TSNFQKKEGSKKRKTNVASEDDVSLQVWTIKEDA-KKELAKDSSTSTMTKKESLQVQPSV 107

Query: 178 EAPLLSMQDSVMSDELLSSPNKDINMICGKLRASDGLGIVDIDSELKDPLVWSSYAPDIY 357
           E  LLSMQD+      L+SPN +IN+IC KL AS GLGIVDIDS+L+D  +W+SYAPDIY
Sbjct: 108 ENSLLSMQDT------LNSPNTEINLICEKLSASVGLGIVDIDSKLRDSPIWTSYAPDIY 161

Query: 358 HSIRVRECERRPLANYIEKLQ 420
            +I VRECERRPLANY+E LQ
Sbjct: 162 TNIHVRECERRPLANYMETLQ 182


Top