BLASTX nr result
ID: Glycyrrhiza24_contig00028873
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00028873 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 130 1e-28 ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-... 96 2e-18 ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-13 emb|CBI37456.3| unnamed protein product [Vitis vinifera] 80 2e-13 ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-... 80 2e-13 >ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] gi|355513943|gb|AES95566.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] Length = 1723 Score = 130 bits (326), Expect = 1e-28 Identities = 71/92 (77%), Positives = 76/92 (82%), Gaps = 1/92 (1%) Frame = -1 Query: 274 EQRVKSTVVKAEK-VNFASESRFLLDMIDKLKSEKAEGTTLNSVINKTGVGSIETGQAMP 98 E RVKSTVVKAEK VNFASES+ LLD+IDKLKSEKAEGTT+NS IN TG GS+ GQA P Sbjct: 680 EARVKSTVVKAEKIVNFASESKSLLDLIDKLKSEKAEGTTINSAINTTGPGSLPIGQATP 739 Query: 97 PVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2 PVY PI N+NTNTGRDYG PANQV QYGN Sbjct: 740 PVYNPI--NSNTNTGRDYG--TPANQVSQYGN 767 >ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Glycine max] Length = 894 Score = 96.3 bits (238), Expect = 2e-18 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 3/94 (3%) Frame = -1 Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMI-DKLKSEKAEGTTL-NSVINKTGVGSIETGQAM 101 EQR+KST+VKAEKVNFAS+SR L++I ++L++EK++G T+ NSV N T +GS+ETGQ Sbjct: 663 EQRIKSTIVKAEKVNFASKSRVNLELIFNELRAEKSKGITIPNSVTNNTRLGSVETGQVT 722 Query: 100 PPVYTPIKSNTNTNTGRDYGMPLPANQVG-QYGN 2 PP Y +N NT RD+GM PANQVG Q+GN Sbjct: 723 PPAY----YKSNANTSRDFGM--PANQVGQQHGN 750 >ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|222841809|gb|EEE79356.1| predicted protein [Populus trichocarpa] Length = 701 Score = 80.9 bits (198), Expect = 1e-13 Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 7/98 (7%) Frame = -1 Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMIDKLKSE-------KAEGTTLNSVINKTGVGSIE 116 EQRVKSTVVK+EKVN++S+SR LLDM++K KS KAE + N +N +G+ Sbjct: 518 EQRVKSTVVKSEKVNYSSQSRLLLDMMEKFKSGNDTSFACKAESSYHNPGVNNAVIGNFG 577 Query: 115 TGQAMPPVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2 + QA PP P+ S + T + LPANQ+GQYGN Sbjct: 578 SRQAGPPGSNPVGSTSYTG-----NVGLPANQLGQYGN 610 >emb|CBI37456.3| unnamed protein product [Vitis vinifera] Length = 754 Score = 79.7 bits (195), Expect = 2e-13 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 6/97 (6%) Frame = -1 Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMIDKLKSE------KAEGTTLNSVINKTGVGSIET 113 EQRVKSTVVKAEKVNF+SESRFLLDM++K K E K+E N + G+G++ Sbjct: 504 EQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPLKSENVISNGGMTNPGLGNVGI 563 Query: 112 GQAMPPVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2 Q+ P V S +N GRD+G PANQ Q+GN Sbjct: 564 RQSTPSVN---YSGNASNAGRDFG--FPANQGVQHGN 595 >ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Vitis vinifera] Length = 882 Score = 79.7 bits (195), Expect = 2e-13 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 6/97 (6%) Frame = -1 Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMIDKLKSE------KAEGTTLNSVINKTGVGSIET 113 EQRVKSTVVKAEKVNF+SESRFLLDM++K K E K+E N + G+G++ Sbjct: 683 EQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPLKSENVISNGGMTNPGLGNVGI 742 Query: 112 GQAMPPVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2 Q+ P V S +N GRD+G PANQ Q+GN Sbjct: 743 RQSTPSVN---YSGNASNAGRDFG--FPANQGVQHGN 774