BLASTX nr result

ID: Glycyrrhiza24_contig00028873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028873
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   130   1e-28
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...    96   2e-18
ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
emb|CBI37456.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...    80   2e-13

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score =  130 bits (326), Expect = 1e-28
 Identities = 71/92 (77%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
 Frame = -1

Query: 274 EQRVKSTVVKAEK-VNFASESRFLLDMIDKLKSEKAEGTTLNSVINKTGVGSIETGQAMP 98
           E RVKSTVVKAEK VNFASES+ LLD+IDKLKSEKAEGTT+NS IN TG GS+  GQA P
Sbjct: 680 EARVKSTVVKAEKIVNFASESKSLLDLIDKLKSEKAEGTTINSAINTTGPGSLPIGQATP 739

Query: 97  PVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2
           PVY PI  N+NTNTGRDYG   PANQV QYGN
Sbjct: 740 PVYNPI--NSNTNTGRDYG--TPANQVSQYGN 767


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 3/94 (3%)
 Frame = -1

Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMI-DKLKSEKAEGTTL-NSVINKTGVGSIETGQAM 101
           EQR+KST+VKAEKVNFAS+SR  L++I ++L++EK++G T+ NSV N T +GS+ETGQ  
Sbjct: 663 EQRIKSTIVKAEKVNFASKSRVNLELIFNELRAEKSKGITIPNSVTNNTRLGSVETGQVT 722

Query: 100 PPVYTPIKSNTNTNTGRDYGMPLPANQVG-QYGN 2
           PP Y      +N NT RD+GM  PANQVG Q+GN
Sbjct: 723 PPAY----YKSNANTSRDFGM--PANQVGQQHGN 750


>ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|222841809|gb|EEE79356.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
 Frame = -1

Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMIDKLKSE-------KAEGTTLNSVINKTGVGSIE 116
           EQRVKSTVVK+EKVN++S+SR LLDM++K KS        KAE +  N  +N   +G+  
Sbjct: 518 EQRVKSTVVKSEKVNYSSQSRLLLDMMEKFKSGNDTSFACKAESSYHNPGVNNAVIGNFG 577

Query: 115 TGQAMPPVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2
           + QA PP   P+ S + T       + LPANQ+GQYGN
Sbjct: 578 SRQAGPPGSNPVGSTSYTG-----NVGLPANQLGQYGN 610


>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
          Length = 754

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
 Frame = -1

Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMIDKLKSE------KAEGTTLNSVINKTGVGSIET 113
           EQRVKSTVVKAEKVNF+SESRFLLDM++K K E      K+E    N  +   G+G++  
Sbjct: 504 EQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPLKSENVISNGGMTNPGLGNVGI 563

Query: 112 GQAMPPVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2
            Q+ P V     S   +N GRD+G   PANQ  Q+GN
Sbjct: 564 RQSTPSVN---YSGNASNAGRDFG--FPANQGVQHGN 595


>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
 Frame = -1

Query: 274 EQRVKSTVVKAEKVNFASESRFLLDMIDKLKSE------KAEGTTLNSVINKTGVGSIET 113
           EQRVKSTVVKAEKVNF+SESRFLLDM++K K E      K+E    N  +   G+G++  
Sbjct: 683 EQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPLKSENVISNGGMTNPGLGNVGI 742

Query: 112 GQAMPPVYTPIKSNTNTNTGRDYGMPLPANQVGQYGN 2
            Q+ P V     S   +N GRD+G   PANQ  Q+GN
Sbjct: 743 RQSTPSVN---YSGNASNAGRDFG--FPANQGVQHGN 774


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