BLASTX nr result

ID: Glycyrrhiza24_contig00028845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028845
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...   550   e-154
ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   547   e-153
ref|XP_003629079.1| Structural maintenance of chromosomes protei...   539   e-151
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   513   e-143
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              508   e-141

>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1242

 Score =  550 bits (1417), Expect = e-154
 Identities = 280/320 (87%), Positives = 291/320 (90%)
 Frame = +3

Query: 3    TQEMIDKHRDVLEEAKSEHDKMKKAVDEMRASEVDADFKLKDMKKAXXXXXXXXXXXXXX 182
            TQE+IDKH  VLE+AKS+++KMKK +DE+RASEVD DFKLKDMKKA              
Sbjct: 923  TQELIDKHTIVLEKAKSDYNKMKKVMDELRASEVDVDFKLKDMKKAYKELEMKRKGYKKR 982

Query: 183  XXXXQTAICKHLEQIQADLVDHEKLQATLADEHLNAACDLKKACEMVTLLEAQLKEMNPN 362
                QTA+ KHLEQIQADLVD EKLQATL DEHLNAACDLKKACEMV LLEAQLKEMNPN
Sbjct: 983  LDDLQTALRKHLEQIQADLVDQEKLQATLDDEHLNAACDLKKACEMVALLEAQLKEMNPN 1042

Query: 363  LDSISEYRKKVSLYNERVEELNTVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM 542
            LDSISEYRKKVS YNERVEELN VTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM
Sbjct: 1043 LDSISEYRKKVSSYNERVEELNAVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM 1102

Query: 543  YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH 722
            YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH
Sbjct: 1103 YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH 1162

Query: 723  YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD 902
            YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD
Sbjct: 1163 YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD 1222

Query: 903  NCTKSITIDPRSFVVCQKAA 962
            NCTKSITI+P SFV+C+KAA
Sbjct: 1223 NCTKSITINPGSFVICEKAA 1242


>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1319

 Score =  547 bits (1409), Expect = e-153
 Identities = 278/319 (87%), Positives = 292/319 (91%)
 Frame = +3

Query: 3    TQEMIDKHRDVLEEAKSEHDKMKKAVDEMRASEVDADFKLKDMKKAXXXXXXXXXXXXXX 182
            TQ++ID+H  VLE+AKSE++KMKK +DE+RASEVDA+FKLKDMKKA              
Sbjct: 1000 TQKVIDEHMIVLEKAKSEYNKMKKVMDELRASEVDAEFKLKDMKKAYKELEMKGKGYKKR 1059

Query: 183  XXXXQTAICKHLEQIQADLVDHEKLQATLADEHLNAACDLKKACEMVTLLEAQLKEMNPN 362
                QTA+ +H+EQIQADLVD EKLQATLADEHLNAACDLKKACEMV LLEAQLKEMNPN
Sbjct: 1060 LDDLQTALHRHIEQIQADLVDQEKLQATLADEHLNAACDLKKACEMVALLEAQLKEMNPN 1119

Query: 363  LDSISEYRKKVSLYNERVEELNTVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM 542
            LDSISEYRKKVS YNERVEELN VTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM
Sbjct: 1120 LDSISEYRKKVSSYNERVEELNAVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM 1179

Query: 543  YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH 722
            YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH
Sbjct: 1180 YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH 1239

Query: 723  YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD 902
            YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD
Sbjct: 1240 YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD 1299

Query: 903  NCTKSITIDPRSFVVCQKA 959
            NCTKSITI+P SFVVC+KA
Sbjct: 1300 NCTKSITINPGSFVVCEKA 1318


>ref|XP_003629079.1| Structural maintenance of chromosomes protein [Medicago truncatula]
            gi|355523101|gb|AET03555.1| Structural maintenance of
            chromosomes protein [Medicago truncatula]
          Length = 1252

 Score =  539 bits (1389), Expect = e-151
 Identities = 280/329 (85%), Positives = 290/329 (88%), Gaps = 9/329 (2%)
 Frame = +3

Query: 3    TQEMIDKHRDVLEEAKSEHDKMKKAVDEMRASEVDADFKLKDMKKAXXXXXXXXXXXXXX 182
            T+EMI KHRD LEEA+SE+DKMKKAVDE+RASEVDADFKLKDMKKA              
Sbjct: 924  TEEMIKKHRDGLEEARSEYDKMKKAVDELRASEVDADFKLKDMKKAYKELEIKGKGYRKR 983

Query: 183  XXXXQTAICKHLEQIQADLVDHEKLQATLADEHLNAACDLKKACEMVTLLEAQLKEMNPN 362
                QTAI KHLEQIQ DLVD+EKL ATL +EHLNAACDLKKACE V LLEAQLKEMNPN
Sbjct: 984  LDELQTAISKHLEQIQVDLVDNEKLHATLTEEHLNAACDLKKACETVALLEAQLKEMNPN 1043

Query: 363  LDSISEYRKKVSLYNERVEELNTVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM 542
            LDSI+EYRKKV+LYNERVEELN VTQERDDIKKQ+DE RK+RLDEFMEGFNAISLKLKEM
Sbjct: 1044 LDSIAEYRKKVALYNERVEELNAVTQERDDIKKQHDELRKRRLDEFMEGFNAISLKLKEM 1103

Query: 543  YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK---------TLSS 695
            YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEK         TLSS
Sbjct: 1104 YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKVSSHPHSIDTLSS 1163

Query: 696  LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELAD 875
            LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELAD
Sbjct: 1164 LALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELAD 1223

Query: 876  RLVGIYKTDNCTKSITIDPRSFVVCQKAA 962
            RLVGIYKTDNCTKSITIDP SFVVCQK A
Sbjct: 1224 RLVGIYKTDNCTKSITIDPCSFVVCQKGA 1252


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Vitis vinifera]
          Length = 1486

 Score =  513 bits (1322), Expect = e-143
 Identities = 256/320 (80%), Positives = 284/320 (88%)
 Frame = +3

Query: 3    TQEMIDKHRDVLEEAKSEHDKMKKAVDEMRASEVDADFKLKDMKKAXXXXXXXXXXXXXX 182
            TQE+ID+H+DVL++AKS+++K+KK VDE+RASEVD D+KL+DMKK               
Sbjct: 1167 TQELIDQHKDVLDKAKSDYEKLKKTVDELRASEVDVDYKLQDMKKLYKELEMKGKGYKRK 1226

Query: 183  XXXXQTAICKHLEQIQADLVDHEKLQATLADEHLNAACDLKKACEMVTLLEAQLKEMNPN 362
                Q A+ KH+EQIQ DLVD EKLQATLAD+ L   C LK+A EMV L+EAQLKEMNPN
Sbjct: 1227 LEELQVALVKHMEQIQKDLVDPEKLQATLADKTLTEDCGLKRALEMVALIEAQLKEMNPN 1286

Query: 363  LDSISEYRKKVSLYNERVEELNTVTQERDDIKKQYDEWRKKRLDEFMEGFNAISLKLKEM 542
            LDSISEYR+KVS+YNERV++LN VTQERDD+KKQYDEW+K+R+DEFM GF+ ISLKLKEM
Sbjct: 1287 LDSISEYRRKVSVYNERVQDLNMVTQERDDVKKQYDEWKKRRMDEFMAGFHTISLKLKEM 1346

Query: 543  YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH 722
            YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH
Sbjct: 1347 YQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH 1406

Query: 723  YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD 902
            YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD
Sbjct: 1407 YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTD 1466

Query: 903  NCTKSITIDPRSFVVCQKAA 962
            NCTKSITI+P SFVVC+KAA
Sbjct: 1467 NCTKSITINPGSFVVCEKAA 1486


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  508 bits (1307), Expect = e-141
 Identities = 257/326 (78%), Positives = 284/326 (87%), Gaps = 6/326 (1%)
 Frame = +3

Query: 3    TQEMIDKHRDVLEEAKSEHDKMKKAVDEMRASEVDADFKLKDMKKAXXXXXXXXXXXXXX 182
            TQE+ID+H+DVL++AKS+++K+KK VDE+RASEVD D+KL+DMKK               
Sbjct: 928  TQELIDQHKDVLDKAKSDYEKLKKTVDELRASEVDVDYKLQDMKKLYKELEMKGKGYKRK 987

Query: 183  XXXXQTAICKHLEQIQADLVDHEKLQATLADEHLNAACDLKKACEMVTLLEAQLKEMNPN 362
                Q A+ KH+EQIQ DLVD EKLQATLAD+ L   C LK+A EMV L+EAQLKEMNPN
Sbjct: 988  LEELQVALVKHMEQIQKDLVDPEKLQATLADKTLTEDCGLKRALEMVALIEAQLKEMNPN 1047

Query: 363  LDSISEYRKKVSLYNERVEELNTVTQERDDIKKQYDEWRKKRL------DEFMEGFNAIS 524
            LDSISEYR+KVS+YNERV++LN VTQERDD+KKQYDEW+K+RL      DEFM GF+ IS
Sbjct: 1048 LDSISEYRRKVSVYNERVQDLNMVTQERDDVKKQYDEWKKRRLVYFTLMDEFMAGFHTIS 1107

Query: 525  LKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLAL 704
            LKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLAL
Sbjct: 1108 LKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLAL 1167

Query: 705  VFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 884
            VFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV
Sbjct: 1168 VFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 1227

Query: 885  GIYKTDNCTKSITIDPRSFVVCQKAA 962
            GIYKTDNCTKSITI+P SFVVC+KAA
Sbjct: 1228 GIYKTDNCTKSITINPGSFVVCEKAA 1253


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