BLASTX nr result

ID: Glycyrrhiza24_contig00028843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028843
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602613.1| F-box protein [Medicago truncatula] gi|35549...    85   5e-15
ref|XP_003599218.1| F-box/kelch-repeat protein [Medicago truncat...    84   9e-15
ref|XP_003599219.1| F-box/kelch-repeat protein [Medicago truncat...    82   6e-14
ref|XP_003602616.1| F-box/kelch-repeat protein [Medicago truncat...    77   1e-12
gb|AFK34264.1| unknown [Medicago truncatula]                           76   2e-12

>ref|XP_003602613.1| F-box protein [Medicago truncatula] gi|355491661|gb|AES72864.1|
           F-box protein [Medicago truncatula]
          Length = 348

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = -2

Query: 270 FAKKHLRMSKHHHLILSSTNSLSDFLLWDSPISSVFNAESN--VVSQMQLSYPHTLNKQH 97
           FAKKHLRMSK   LI+SS N   + L WDS ISSVF+  SN   V+Q QL  P +L K  
Sbjct: 84  FAKKHLRMSKRVALIVSSVNDSGEPLFWDSSISSVFSNASNSSSVTQTQLICPFSLTKY- 142

Query: 96  IYFPSPLIVCSCDGILCFYVDEDFTLLWNPSI 1
                 L +CSCDGILCF +    ++LWNPSI
Sbjct: 143 ------LEICSCDGILCFTIARRSSVLWNPSI 168


>ref|XP_003599218.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488266|gb|AES69469.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 372

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = -2

Query: 270 FAKKHLRMS-KHHHLILSSTNSLSDFLLWDSPISSVFNAESNVVSQMQLSYPHTLNKQHI 94
           FAK HL++S K HHL+++S N+L+D +L+DSPI SVF+  S +V+Q QL  P+TL     
Sbjct: 56  FAKNHLQLSTKRHHLMIASMNNLADLVLYDSPIHSVFST-STIVTQTQLYPPNTLTNGSK 114

Query: 93  YFPSPLIVCSCDGILCFYVDEDFTLLWNPSI 1
           Y     ++CSCDGI C ++     +LWNPSI
Sbjct: 115 YVD---VLCSCDGIFCCFLKPGSYVLWNPSI 142


>ref|XP_003599219.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488267|gb|AES69470.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 417

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = -2

Query: 270 FAKKHLRMS-KHHHLILSSTNSLSDFLLWDSPISSVFNAESNVVSQMQLSYPHTLNKQHI 94
           FAKKHLR+S K HHLI+   +  S  +L+DSPISS F+     V+Q QLSYP        
Sbjct: 71  FAKKHLRLSIKRHHLIVCPADLSSRVILYDSPISSFFSKSG--VTQTQLSYPK------F 122

Query: 93  YFPSPLIVCSCDGILCFYVDEDFTLLWNPSI 1
            F +P  + SCDGILC  +D+   +LWNPSI
Sbjct: 123 QFENPTNISSCDGILCLTIDDGSAILWNPSI 153


>ref|XP_003602616.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355491664|gb|AES72867.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 345

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = -2

Query: 270 FAKKHLRMSKHHHLILSSTNSLSDFLLWDSPISSVF-NAESNVVSQMQLSYPHTLNKQ-H 97
           FAKK L MSK   LI+SS N   + LLWDS ISSVF N  ++ V+Q QL+ P + N    
Sbjct: 42  FAKKQLCMSKKR-LIVSSVNDPDELLLWDSSISSVFSNVSNSTVTQTQLNCPISFNSLFR 100

Query: 96  IYFPSPLIVCSCDGILCFYVDEDFTLLWNPSI 1
           + + + L +CSC GILCF +   +  LWNPS+
Sbjct: 101 LLYGNNLEICSCHGILCFAIAGLYAFLWNPSL 132


>gb|AFK34264.1| unknown [Medicago truncatula]
          Length = 405

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/91 (48%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = -2

Query: 270 FAKKHLRMSKH-HHLILSSTNSLSDFLLWDSPISSVFNAESNVVSQMQLSYPHTLNKQHI 94
           FAKKHL  S   HHLIL S N    F L  SPI SV +  +  V Q QL+YP  L ++  
Sbjct: 91  FAKKHLHSSTTPHHLILRSNNGSGRFALIVSPIQSVLSTSTVPVPQTQLTYPTCLTEE-- 148

Query: 93  YFPSPLIVCSCDGILCFYVDEDFTLLWNPSI 1
            F SP   CSCDGI+C   D    +LWNP I
Sbjct: 149 -FASPYEWCSCDGIICLTTDYSSAVLWNPFI 178


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