BLASTX nr result

ID: Glycyrrhiza24_contig00028824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028824
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601182.1| Thyroid receptor-interacting protein [Medica...   157   1e-36
ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 ho...   155   2e-36
ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 ho...   151   6e-35
ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...   124   6e-27
ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...   113   1e-23

>ref|XP_003601182.1| Thyroid receptor-interacting protein [Medicago truncatula]
           gi|355490230|gb|AES71433.1| Thyroid receptor-interacting
           protein [Medicago truncatula]
          Length = 461

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/84 (86%), Positives = 81/84 (96%)
 Frame = -1

Query: 309 VLPNYATARGRLNAPDFHEATTSMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF 130
           +LPNYA+A+ R+NAPDFHEATT MQLCK+L+ETAEACEGMSGRSLRKLPFLAHAALANPF
Sbjct: 378 MLPNYASAKQRMNAPDFHEATTFMQLCKKLVETAEACEGMSGRSLRKLPFLAHAALANPF 437

Query: 129 ECNPIKFLCAMIETAKRERSELPD 58
           +CNPIKFLC MI+TAKRERSELPD
Sbjct: 438 DCNPIKFLCTMIDTAKRERSELPD 461


>ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max]
          Length = 448

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/84 (88%), Positives = 77/84 (91%)
 Frame = -1

Query: 309 VLPNYATARGRLNAPDFHEATTSMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF 130
           + PNYA+A+ RLN PDFHE  T MQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF
Sbjct: 365 MFPNYASAKDRLNTPDFHEDATFMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF 424

Query: 129 ECNPIKFLCAMIETAKRERSELPD 58
           ECNPIKFLC MIETAKRERSELPD
Sbjct: 425 ECNPIKFLCTMIETAKRERSELPD 448


>ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max]
          Length = 448

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/84 (85%), Positives = 77/84 (91%)
 Frame = -1

Query: 309 VLPNYATARGRLNAPDFHEATTSMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF 130
           +LP+YA+A+ RLN  DFHE  T MQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF
Sbjct: 365 MLPHYASAKDRLNTLDFHEDATFMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF 424

Query: 129 ECNPIKFLCAMIETAKRERSELPD 58
           ECNPIKFLC M+ETAKRERSELPD
Sbjct: 425 ECNPIKFLCTMVETAKRERSELPD 448


>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/84 (70%), Positives = 69/84 (82%)
 Frame = -1

Query: 309 VLPNYATARGRLNAPDFHEATTSMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF 130
           +LPNY+T R +LNAPD  EA   +  CKQLLE AEACEGMSGRSLRKLPFLAHAAL+NP 
Sbjct: 381 MLPNYSTLREKLNAPDIQEAQPVLPFCKQLLEAAEACEGMSGRSLRKLPFLAHAALSNPN 440

Query: 129 ECNPIKFLCAMIETAKRERSELPD 58
            C+  +FLCAMI+TA+RE SELP+
Sbjct: 441 SCDASEFLCAMIDTARREHSELPE 464


>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%)
 Frame = -1

Query: 309 VLPNYATARGRLNAPDFHEATTSMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPF 130
           VLPNY T + ++N     EA T ++L KQLLE AEACEG+SGRSLRKLPFLAHAAL++P+
Sbjct: 377 VLPNYPTLKEKMNGSAAQEAQTPVKLGKQLLEAAEACEGLSGRSLRKLPFLAHAALSDPY 436

Query: 129 ECNPIKFLCAMIETAKRERSELPD 58
            C+P KFL  M++ A+RERSELPD
Sbjct: 437 SCDPSKFLSTMMDAARRERSELPD 460