BLASTX nr result

ID: Glycyrrhiza24_contig00028808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028808
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529823.1| PREDICTED: uncharacterized protein LOC100799...    78   8e-13
ref|XP_003627209.1| hypothetical protein MTR_8g018800 [Medicago ...    77   2e-12

>ref|XP_003529823.1| PREDICTED: uncharacterized protein LOC100799093 [Glycine max]
          Length = 590

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 59/167 (35%), Positives = 69/167 (41%), Gaps = 43/167 (25%)
 Frame = +2

Query: 8   SQLPSPPPAVRKMRRGAATKENAATVASAGFTASMXXXXXXXXXXXXXXXXKAVRRNTKR 187
           +Q+  PPPA R   +G          A A                      K VRRN KR
Sbjct: 224 AQISPPPPATRS--KGVRRNVKRTYQAEAVEKHETNDFPVMDSRPPPVTITKGVRRNAKR 281

Query: 188 TYEAETIEKPESNDFVAGNSE--------------------------------------- 250
           TY+ ET+EK E+NDF   NS+                                       
Sbjct: 282 TYQPETMEKRETNDFDEQNSQTLPSPPPPPVTRRRGVRRNAKPEGNDSVVKSSPPPPPPP 341

Query: 251 PPLPLSAVR----KKKRGTATKEFLTSFRVNRKKQRQRSVENFESIL 379
           PPLP    R    KKKRG+ATKEFL S R  +KKQRQRSVENF+ IL
Sbjct: 342 PPLPAEEARTVSGKKKRGSATKEFLISLRGKKKKQRQRSVENFDIIL 388


>ref|XP_003627209.1| hypothetical protein MTR_8g018800 [Medicago truncatula]
           gi|355521231|gb|AET01685.1| hypothetical protein
           MTR_8g018800 [Medicago truncatula]
          Length = 684

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 54/129 (41%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
 Frame = +2

Query: 17  PSPPPAVRKMRRGAATKENAATVASAGFTASMXXXXXXXXXXXXXXXXKAVRRNTKRTYE 196
           P   PA RK +  + ++ N A V SA F++ +                K VR N KRT +
Sbjct: 366 PHRQPAARKKKIRSESEVNTAAVTSAEFSSPVPEQELNPQLPVMRT--KGVRGNFKRTNQ 423

Query: 197 AETIEKPESNDFVAGNSEP---PLPLSAVRK------KKRGTATKEFLTSFRVNRKKQRQ 349
            + IEK E NDF   N  P   P    A RK      KKRG ATKEFL S R  +KKQR 
Sbjct: 424 PKAIEKLEDNDFFVENYLPQTVPQRSMAERKTGIPLKKKRGNATKEFLASLRGKKKKQRS 483

Query: 350 RSVENFESI 376
           +SVENFE+I
Sbjct: 484 KSVENFETI 492


Top