BLASTX nr result

ID: Glycyrrhiza24_contig00028780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028780
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   256   1e-66
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   211   4e-53
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   210   8e-53
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              210   8e-53
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...   202   3e-50

>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score =  256 bits (655), Expect = 1e-66
 Identities = 124/172 (72%), Positives = 134/172 (77%)
 Frame = +2

Query: 2    KQNIESVCVKDNPAFRNALLDFANEWKSLRPIERXXXXXXXXXXXXAVELCYLIESXXXX 181
            KQ  E V VKDNPA+R+AL+ FA EWK+LR IER            AVELCYL ES    
Sbjct: 878  KQKTEFVTVKDNPAYRHALMAFAEEWKNLRSIERRKLLGKPLQLPLAVELCYLSESNNHN 937

Query: 182  XXXXXXXXSRRRMTPLMEISYPLPSDAVWRKVYLRSGLGKKEKEYTQGWSLNDEPLCKLC 361
                    S+RR TPLMEISYPLPSDAVWRKV LRSGLGKKEKEYTQGWS+ DEPLCKLC
Sbjct: 938  NKGLLNGGSKRRRTPLMEISYPLPSDAVWRKVSLRSGLGKKEKEYTQGWSVTDEPLCKLC 997

Query: 362  QKQCMGNNSKTPEFFEDLFCNLVCYEEYRMRTSKRFLRQELFQIEQGVCTNC 517
            QKQC+ NN+KTPEFFEDLFCNLVCYEEYRMRTS RFLR+ELF+IE GVCTNC
Sbjct: 998  QKQCLANNAKTPEFFEDLFCNLVCYEEYRMRTSNRFLREELFKIEHGVCTNC 1049


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score =  211 bits (538), Expect = 4e-53
 Identities = 102/163 (62%), Positives = 114/163 (69%)
 Frame = +2

Query: 29   KDNPAFRNALLDFANEWKSLRPIERXXXXXXXXXXXXAVELCYLIESXXXXXXXXXXXXS 208
            K  P +R+ALL F  EW  LRPIER            ++ELCYL E+            S
Sbjct: 904  KGIPPYRHALLAFIKEWNKLRPIERRKLVGKTLQLPLSIELCYLNENINHSTEGLLKGGS 963

Query: 209  RRRMTPLMEISYPLPSDAVWRKVYLRSGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNNS 388
            +RRMTP  EISYPLPS AVW+ V L S  GKKEK+YTQGW+L DEPLCKLCQ  C G+N+
Sbjct: 964  KRRMTPWFEISYPLPSGAVWKNVNLSSSYGKKEKQYTQGWTLMDEPLCKLCQTPCKGSNA 1023

Query: 389  KTPEFFEDLFCNLVCYEEYRMRTSKRFLRQELFQIEQGVCTNC 517
            KTPEFFEDLFCNL CYEEYR+RTS R LRQELFQIE GVCTNC
Sbjct: 1024 KTPEFFEDLFCNLSCYEEYRIRTSSRSLRQELFQIEYGVCTNC 1066


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score =  210 bits (535), Expect = 8e-53
 Identities = 100/164 (60%), Positives = 117/164 (71%)
 Frame = +2

Query: 26   VKDNPAFRNALLDFANEWKSLRPIERXXXXXXXXXXXXAVELCYLIESXXXXXXXXXXXX 205
            VKDNPA+R+ LL F  EW +LRPIE+             VELC L E             
Sbjct: 937  VKDNPAYRDVLLAFVKEWNNLRPIEQKKLLQKPLQLPLTVELCCLSEGINHSSGGLLKRG 996

Query: 206  SRRRMTPLMEISYPLPSDAVWRKVYLRSGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNN 385
            S+RR TPL +ISYPLPS+AVW+KVYL SG GK+ KEYTQGW+L DEPLCKLCQ  C  +N
Sbjct: 997  SKRRTTPLGDISYPLPSNAVWKKVYLCSGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSN 1056

Query: 386  SKTPEFFEDLFCNLVCYEEYRMRTSKRFLRQELFQIEQGVCTNC 517
            +KTP+FFEDLFC+L CYEEYR+RTS R LRQELFQIE G+CT+C
Sbjct: 1057 AKTPDFFEDLFCSLGCYEEYRIRTSNRSLRQELFQIEHGICTSC 1100


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  210 bits (535), Expect = 8e-53
 Identities = 100/164 (60%), Positives = 117/164 (71%)
 Frame = +2

Query: 26   VKDNPAFRNALLDFANEWKSLRPIERXXXXXXXXXXXXAVELCYLIESXXXXXXXXXXXX 205
            VKDNPA+R+ LL F  EW +LRPIE+             VELC L E             
Sbjct: 858  VKDNPAYRDVLLAFVKEWNNLRPIEQKKLLQKPLQLPLTVELCCLSEGINHSSGGLLKRG 917

Query: 206  SRRRMTPLMEISYPLPSDAVWRKVYLRSGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNN 385
            S+RR TPL +ISYPLPS+AVW+KVYL SG GK+ KEYTQGW+L DEPLCKLCQ  C  +N
Sbjct: 918  SKRRTTPLGDISYPLPSNAVWKKVYLCSGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSN 977

Query: 386  SKTPEFFEDLFCNLVCYEEYRMRTSKRFLRQELFQIEQGVCTNC 517
            +KTP+FFEDLFC+L CYEEYR+RTS R LRQELFQIE G+CT+C
Sbjct: 978  AKTPDFFEDLFCSLGCYEEYRIRTSNRSLRQELFQIEHGICTSC 1021


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score =  202 bits (513), Expect = 3e-50
 Identities = 97/164 (59%), Positives = 116/164 (70%)
 Frame = +2

Query: 26  VKDNPAFRNALLDFANEWKSLRPIERXXXXXXXXXXXXAVELCYLIESXXXXXXXXXXXX 205
           +K NP  R+ALL F  EW +LRPIER             VELCYL ES            
Sbjct: 402 LKGNPVSRHALLSFIKEWNALRPIERRKLRGKTLQLPLRVELCYLNESTNHKIGGLLKGG 461

Query: 206 SRRRMTPLMEISYPLPSDAVWRKVYLRSGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNN 385
           S+RR+TPL EIS+PLPS+A+ +KV+L S  G+KEK+YTQGW+L DEPLCKLCQ  C G+N
Sbjct: 462 SKRRLTPLGEISHPLPSNAILKKVHLSSSYGQKEKQYTQGWTLMDEPLCKLCQMPCKGSN 521

Query: 386 SKTPEFFEDLFCNLVCYEEYRMRTSKRFLRQELFQIEQGVCTNC 517
           +KTP +FEDLFCNL+C EEYR+RTS R LRQELF+IE GVCT C
Sbjct: 522 AKTPVYFEDLFCNLICCEEYRLRTSSRSLRQELFEIEHGVCTIC 565


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