BLASTX nr result

ID: Glycyrrhiza24_contig00028746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028746
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   173   1e-41
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   171   4e-41
sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catal...   169   2e-40
dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Oryza sa...   169   2e-40

>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  176 bits (445), Expect = 2e-42
 Identities = 89/106 (83%), Positives = 94/106 (88%)
 Frame = -2

Query: 319 KKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSS 140
           KK  +YAGGLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTTVERS DG  PRLPSS
Sbjct: 677 KKGPAYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSMDGLVPRLPSS 736

Query: 139 TTKGVLPELLKNLVERRKMVKRLMKTASGFEVLQLDIRQQALKLTA 2
            T GVLPELLKNLVERR+MVK  MK ASG +V QLDI+QQALKLTA
Sbjct: 737 KTTGVLPELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTA 782


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  173 bits (439), Expect = 1e-41
 Identities = 88/106 (83%), Positives = 94/106 (88%)
 Frame = -2

Query: 319  KKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSS 140
            KK  +Y+GGLVLEPK+GLYDKYILLLDFNSLYPSIIQEYNICFTTVERS DGS PRLPSS
Sbjct: 892  KKGPAYSGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSPDGSVPRLPSS 951

Query: 139  TTKGVLPELLKNLVERRKMVKRLMKTASGFEVLQLDIRQQALKLTA 2
             T GVLPELLK LVERRK VK  +KTASG +V QLDI+QQALKLTA
Sbjct: 952  KTTGVLPELLKKLVERRKTVKSRLKTASGLKVQQLDIQQQALKLTA 997


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/106 (81%), Positives = 93/106 (87%)
 Frame = -2

Query: 319  KKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSS 140
            KK  +Y GGLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTTVE+S+DG  PRLPS 
Sbjct: 892  KKGPAYVGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVEKSTDGLVPRLPSI 951

Query: 139  TTKGVLPELLKNLVERRKMVKRLMKTASGFEVLQLDIRQQALKLTA 2
             T GVLPELLKNLVERR+MVK  MK ASG +V QLDI+QQALKLTA
Sbjct: 952  KTTGVLPELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTA 997


>sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catalytic subunit
          Length = 1534

 Score =  169 bits (428), Expect = 2e-40
 Identities = 84/106 (79%), Positives = 94/106 (88%)
 Frame = -2

Query: 319  KKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSS 140
            KK  SYAGGLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTTV+RS+DG+ P LP+S
Sbjct: 900  KKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVDRSADGNVPNLPAS 959

Query: 139  TTKGVLPELLKNLVERRKMVKRLMKTASGFEVLQLDIRQQALKLTA 2
             T GVLPELLK+LVERR+MVK  +KTASG +  Q DI+QQALKLTA
Sbjct: 960  KTTGVLPELLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTA 1005


>dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Oryza sativa]
          Length = 1243

 Score =  169 bits (428), Expect = 2e-40
 Identities = 84/106 (79%), Positives = 94/106 (88%)
 Frame = -2

Query: 319 KKAASYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSDGSFPRLPSS 140
           KK  SYAGGLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTTV+RS+DG+ P LP+S
Sbjct: 604 KKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVDRSADGNVPNLPAS 663

Query: 139 TTKGVLPELLKNLVERRKMVKRLMKTASGFEVLQLDIRQQALKLTA 2
            T GVLPELLK+LVERR+MVK  +KTASG +  Q DI+QQALKLTA
Sbjct: 664 KTTGVLPELLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTA 709


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