BLASTX nr result

ID: Glycyrrhiza24_contig00028725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028725
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612949.1| ABC transporter G family member [Medicago tr...   230   1e-58
ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6...   204   8e-51
emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]   201   7e-50
ref|XP_002310338.1| white-brown-complex ABC transporter family [...   197   6e-49
ref|XP_002527217.1| ATP-binding cassette transporter, putative [...   191   4e-47

>ref|XP_003612949.1| ABC transporter G family member [Medicago truncatula]
           gi|163889368|gb|ABY48138.1| ABC transporter [Medicago
           truncatula] gi|258518205|gb|ACV73543.1| STR2 [Medicago
           truncatula] gi|258518207|gb|ACV73544.1| STR2 [Medicago
           truncatula] gi|355514284|gb|AES95907.1| ABC transporter
           G family member [Medicago truncatula]
          Length = 727

 Score =  230 bits (586), Expect = 1e-58
 Identities = 108/121 (89%), Positives = 116/121 (95%)
 Frame = -2

Query: 487 SVVPNYILGYAAVIAFTALFFLFCGYFLSSQDIPSYWRWMNKVSTMTYPYEGLLMNQYQT 308
           S+VPNYILGYAAVIAFTALFFLFCGYFLSS+DIP YWRWMNKVSTMTYPYEGLLMN+YQT
Sbjct: 607 SIVPNYILGYAAVIAFTALFFLFCGYFLSSEDIPLYWRWMNKVSTMTYPYEGLLMNEYQT 666

Query: 307 NDTFGTNGGMPVTGFDILNSLHIGTDESKKRNNVLIMLGWAVLYRILFYIILRFASKNQR 128
           N+TFG+N G+ +TGFDIL SLHIGT+E KKRNNVLIMLGWAVLYRILFYIILRFASKNQR
Sbjct: 667 NETFGSNDGVSITGFDILKSLHIGTEEIKKRNNVLIMLGWAVLYRILFYIILRFASKNQR 726

Query: 127 S 125
           S
Sbjct: 727 S 727


>ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6-like [Glycine max]
          Length = 729

 Score =  204 bits (518), Expect = 8e-51
 Identities = 98/123 (79%), Positives = 106/123 (86%), Gaps = 2/123 (1%)
 Frame = -2

Query: 487 SVVPNYILGYAAVIAFTALFFLFCGYFLSSQDIPSYWRWMNKVSTMTYPYEGLLMNQYQT 308
           SVVPNYILGYA VIAFTALFFLFCGYFL+SQDIP +WRWMNK+STMTYPYEGLLMNQYQT
Sbjct: 607 SVVPNYILGYAVVIAFTALFFLFCGYFLNSQDIPHFWRWMNKISTMTYPYEGLLMNQYQT 666

Query: 307 NDTFGTN--GGMPVTGFDILNSLHIGTDESKKRNNVLIMLGWAVLYRILFYIILRFASKN 134
           NDTFG     G  +TGFDIL SLHI   E +KR  VLIM GWAVLYR+LFY++LRFASKN
Sbjct: 667 NDTFGFGYLDGAAITGFDILKSLHIDILERRKRTIVLIMFGWAVLYRVLFYLVLRFASKN 726

Query: 133 QRS 125
           QRS
Sbjct: 727 QRS 729


>emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]
          Length = 725

 Score =  201 bits (510), Expect = 7e-50
 Identities = 96/122 (78%), Positives = 105/122 (86%), Gaps = 1/122 (0%)
 Frame = -2

Query: 487 SVVPNYILGYAAVIAFTALFFLFCGYFLSSQDIPSYWRWMNKVSTMTYPYEGLLMNQYQT 308
           SVVPNYILGYAAVIAFTALFFLFCGYFL+ QDIPSYW+WMNK STMTYPYEGLLMNQYQT
Sbjct: 604 SVVPNYILGYAAVIAFTALFFLFCGYFLNGQDIPSYWKWMNKFSTMTYPYEGLLMNQYQT 663

Query: 307 NDTFGTNG-GMPVTGFDILNSLHIGTDESKKRNNVLIMLGWAVLYRILFYIILRFASKNQ 131
           NDTFG N  G  +TG DILN L++ T E  K   V IMLGWAVLYR+LFY++LRFASKNQ
Sbjct: 664 NDTFGVNPYGQNITGNDILNQLNVSTVEFDKWKKVFIMLGWAVLYRVLFYVVLRFASKNQ 723

Query: 130 RS 125
           R+
Sbjct: 724 RT 725


>ref|XP_002310338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222853241|gb|EEE90788.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score =  197 bits (502), Expect = 6e-49
 Identities = 98/122 (80%), Positives = 103/122 (84%), Gaps = 1/122 (0%)
 Frame = -2

Query: 487 SVVPNYILGYAAVIAFTALFFLFCGYFLSSQDIPSYWRWMNKVSTMTYPYEGLLMNQYQT 308
           SVVPNYILGYAAVIAFTALFFLFCGYFL+S DIP YWRWMNK+STMTY YEGLLMNQYQT
Sbjct: 611 SVVPNYILGYAAVIAFTALFFLFCGYFLNSHDIPIYWRWMNKISTMTYSYEGLLMNQYQT 670

Query: 307 NDTFGTN-GGMPVTGFDILNSLHIGTDESKKRNNVLIMLGWAVLYRILFYIILRFASKNQ 131
           +D FG N  G  V G  IL SL I TDESKK  NVL+MLGWAVLYRI FYI+LRF SKNQ
Sbjct: 671 SDPFGINPAGQIVNGTTILKSLGISTDESKKWENVLVMLGWAVLYRIFFYIVLRFFSKNQ 730

Query: 130 RS 125
           RS
Sbjct: 731 RS 732


>ref|XP_002527217.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533393|gb|EEF35143.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 724

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/122 (76%), Positives = 104/122 (85%), Gaps = 1/122 (0%)
 Frame = -2

Query: 487 SVVPNYILGYAAVIAFTALFFLFCGYFLSSQDIPSYWRWMNKVSTMTYPYEGLLMNQYQT 308
           SVVPNYILGYAAVIAFTALFFLFCGYFL+S DIP+YW+WMN +STM+YPYEGLLMN+YQT
Sbjct: 603 SVVPNYILGYAAVIAFTALFFLFCGYFLNSHDIPTYWKWMNTISTMSYPYEGLLMNEYQT 662

Query: 307 NDTFG-TNGGMPVTGFDILNSLHIGTDESKKRNNVLIMLGWAVLYRILFYIILRFASKNQ 131
           +D FG T  G P+ G  IL SL+I T+ESKK   VL+MLGWAVLYRI FYIILRF SK Q
Sbjct: 663 SDVFGYTPAGDPINGTTILGSLNISTNESKKWEKVLVMLGWAVLYRIFFYIILRFFSKIQ 722

Query: 130 RS 125
           RS
Sbjct: 723 RS 724


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