BLASTX nr result

ID: Glycyrrhiza24_contig00028701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028701
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   107   1e-21
ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [M...   105   4e-21
ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helica...    74   1e-11
ref|XP_004135377.1| PREDICTED: probable ATP-dependent RNA helica...    74   1e-11
emb|CBI18267.3| unnamed protein product [Vitis vinifera]               73   2e-11

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = +1

Query: 1   REYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLDGNADSLVDESVMEKVLQKRSLRMRNMQ 180
           +EYLDRLQLNS KTTD LD + STNQVKDI++D NADS VDESVMEKVLQKRSLRMRNMQ
Sbjct: 185 QEYLDRLQLNSAKTTDSLDDVNSTNQVKDINMDENADSFVDESVMEKVLQKRSLRMRNMQ 244

Query: 181 RAWK 192
           RAW+
Sbjct: 245 RAWQ 248


>ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355504185|gb|AES85388.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 279

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/64 (78%), Positives = 59/64 (92%)
 Frame = +1

Query: 1   REYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLDGNADSLVDESVMEKVLQKRSLRMRNMQ 180
           +EYLDRLQLNS KTTD LD++ STNQ++DID+D NA+S VDESVMEKVLQKRSLRMRNMQ
Sbjct: 171 QEYLDRLQLNSAKTTDSLDNLNSTNQIRDIDMDENANSFVDESVMEKVLQKRSLRMRNMQ 230

Query: 181 RAWK 192
           R+W+
Sbjct: 231 RSWQ 234


>ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1144

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/76 (51%), Positives = 55/76 (72%)
 Frame = +1

Query: 1   REYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLDGNADSLVDESVMEKVLQKRSLRMRNMQ 180
           +E+ DR++L+S K +D  + +KS  +VKD+++D   D  +D SVMEKVLQ+RSLRMRNMQ
Sbjct: 170 QEHCDRIRLSSGKGSDIPNDVKSIEEVKDVNMDECEDPYLDGSVMEKVLQRRSLRMRNMQ 229

Query: 181 RAWKVIFLLV*LLDFR 228
           RAW+       +LDFR
Sbjct: 230 RAWQESPEGRKILDFR 245


>ref|XP_004135377.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1144

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/76 (51%), Positives = 55/76 (72%)
 Frame = +1

Query: 1   REYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLDGNADSLVDESVMEKVLQKRSLRMRNMQ 180
           +E+ DR++L+S K +D  + +KS  +VKD+++D   D  +D SVMEKVLQ+RSLRMRNMQ
Sbjct: 170 QEHCDRIRLSSGKGSDIPNDVKSIEEVKDVNMDECEDPYLDGSVMEKVLQRRSLRMRNMQ 229

Query: 181 RAWKVIFLLV*LLDFR 228
           RAW+       +LDFR
Sbjct: 230 RAWQESPEGRKILDFR 245


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/76 (51%), Positives = 52/76 (68%)
 Frame = +1

Query: 1   REYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLDGNADSLVDESVMEKVLQKRSLRMRNMQ 180
           +E+LDR+ L+S K +D  D        +D++ + N DSL+D SVMEKVLQ+RSLRMRNMQ
Sbjct: 160 QEHLDRMLLSSGKVSDCSDDANGNGGFEDVNPEDNPDSLLDGSVMEKVLQRRSLRMRNMQ 219

Query: 181 RAWKVIFLLV*LLDFR 228
           RAW+       +LDFR
Sbjct: 220 RAWQESPEGKKMLDFR 235


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