BLASTX nr result

ID: Glycyrrhiza24_contig00028698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028698
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547133.1| PREDICTED: heterogeneous nuclear ribonucleop...   148   4e-34
ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleop...   129   2e-28
emb|CBI23305.3| unnamed protein product [Vitis vinifera]              129   2e-28
emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]   129   2e-28
ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop...   129   3e-28

>ref|XP_003547133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Glycine max]
          Length = 517

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 3/111 (2%)
 Frame = -3

Query: 324 KRHFPDDDEEEKVIAPTKKAKESESLSSP---RVVLNPADCDLDFNIECNGISGYGLNEE 154
           KRHF ++D++    +   K  ESES +SP   RV LNPADCDLDF+I+ NG  GYGL+EE
Sbjct: 5   KRHFAEEDDDPHSFSKKSKESESESDASPSSLRVFLNPADCDLDFHIDGNGHVGYGLHEE 64

Query: 153 GFGYCWSGARASVGIRRGRYCFGVKVVSEQPVDINDTAPDQRHLCRLGVSR 1
           GF YCWSGARA+VGI RGRYCF  KVVS Q V++ DTAP+Q+H+CRLG+SR
Sbjct: 65  GFAYCWSGARANVGITRGRYCFACKVVSAQTVNMQDTAPEQQHICRLGISR 115


>ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Vitis vinifera]
          Length = 590

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/108 (53%), Positives = 74/108 (68%)
 Frame = -3

Query: 324 KRHFPDDDEEEKVIAPTKKAKESESLSSPRVVLNPADCDLDFNIECNGISGYGLNEEGFG 145
           KR   + +E E        +   E  +  RVVLNPADCDLDFNI  +G+ G  L++ GF 
Sbjct: 152 KRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 211

Query: 144 YCWSGARASVGIRRGRYCFGVKVVSEQPVDINDTAPDQRHLCRLGVSR 1
           YCWSGAR +VGI  G+YCFG K++S QPVD+ DT PDQ+H+CRLG+SR
Sbjct: 212 YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISR 259


>emb|CBI23305.3| unnamed protein product [Vitis vinifera]
          Length = 1459

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/108 (53%), Positives = 74/108 (68%)
 Frame = -3

Query: 324 KRHFPDDDEEEKVIAPTKKAKESESLSSPRVVLNPADCDLDFNIECNGISGYGLNEEGFG 145
           KR   + +E E        +   E  +  RVVLNPADCDLDFNI  +G+ G  L++ GF 
Sbjct: 13  KRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 72

Query: 144 YCWSGARASVGIRRGRYCFGVKVVSEQPVDINDTAPDQRHLCRLGVSR 1
           YCWSGAR +VGI  G+YCFG K++S QPVD+ DT PDQ+H+CRLG+SR
Sbjct: 73  YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISR 120


>emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
          Length = 1021

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/108 (53%), Positives = 74/108 (68%)
 Frame = -3

Query: 324 KRHFPDDDEEEKVIAPTKKAKESESLSSPRVVLNPADCDLDFNIECNGISGYGLNEEGFG 145
           KR   + +E E        +   E  +  RVVLNPADCDLDFNI  +G+ G  L++ GF 
Sbjct: 172 KRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 231

Query: 144 YCWSGARASVGIRRGRYCFGVKVVSEQPVDINDTAPDQRHLCRLGVSR 1
           YCWSGAR +VGI  G+YCFG K++S QPVD+ DT PDQ+H+CRLG+SR
Sbjct: 232 YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISR 279


>ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Vitis vinifera]
          Length = 514

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/108 (53%), Positives = 74/108 (68%)
 Frame = -3

Query: 324 KRHFPDDDEEEKVIAPTKKAKESESLSSPRVVLNPADCDLDFNIECNGISGYGLNEEGFG 145
           KR   + +E E        +   E  +  RVVLNPADCDLDFNI  +G+ G  L++ GF 
Sbjct: 5   KRQLSEPEEPESKKPKAVLSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 64

Query: 144 YCWSGARASVGIRRGRYCFGVKVVSEQPVDINDTAPDQRHLCRLGVSR 1
           YCWSGAR +VGI  G+YCFG K++S QPVD+ DT PDQ+H+CRLG+SR
Sbjct: 65  YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISR 112


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