BLASTX nr result

ID: Glycyrrhiza24_contig00028659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028659
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541607.1| PREDICTED: DNA repair and recombination prot...   143   1e-32
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...   141   5e-32
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...   123   1e-26
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...   123   1e-26
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...   123   2e-26

>ref|XP_003541607.1| PREDICTED: DNA repair and recombination protein RDH54-like [Glycine
            max]
          Length = 1001

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/72 (91%), Positives = 68/72 (94%)
 Frame = +2

Query: 2    VFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFETVGVKECGDLFLESP 181
            VFVYRL++ADSPEEEDH TCFKKELISKMWFEWNEYCGDQAFE E VGVKEC DLFLESP
Sbjct: 913  VFVYRLVSADSPEEEDHSTCFKKELISKMWFEWNEYCGDQAFEVEEVGVKECDDLFLESP 972

Query: 182  LLGEDVKALYKR 217
            LLGEDVKALYKR
Sbjct: 973  LLGEDVKALYKR 984


>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/72 (90%), Positives = 68/72 (94%)
 Frame = +2

Query: 2    VFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFETVGVKECGDLFLESP 181
            VFVYRL++ADSPEEEDH TCFKKELISKMWFEWNEYCGD+AFE E V VKECGDLFLESP
Sbjct: 812  VFVYRLVSADSPEEEDHNTCFKKELISKMWFEWNEYCGDRAFEVEAVEVKECGDLFLESP 871

Query: 182  LLGEDVKALYKR 217
            LLGEDVKALYKR
Sbjct: 872  LLGEDVKALYKR 883


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = +2

Query: 2    VFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFETVGVKECGDLFLESP 181
            VF YRL+A DSPEE DH TCFKKELI+KMWFEWNEYCG   FE ETV VK+CGD FLE+P
Sbjct: 832  VFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETVDVKQCGDNFLETP 891

Query: 182  LLGEDVKALYKR 217
            LLG+DVK LY+R
Sbjct: 892  LLGQDVKVLYRR 903


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = +2

Query: 2    VFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFETVGVKECGDLFLESP 181
            VF YRL+A DSPEE DH TCFKKELI+KMWFEWNEYCG   FE ETV VK+CGD FLE+P
Sbjct: 832  VFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETVDVKQCGDNFLETP 891

Query: 182  LLGEDVKALYKR 217
            LLG+DVK LY+R
Sbjct: 892  LLGQDVKVLYRR 903


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 944

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/72 (79%), Positives = 61/72 (84%)
 Frame = +2

Query: 2    VFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFETVGVKECGDLFLESP 181
            V VY+L+AADSPEEEDH TCFKKELISKMWFEWNEYCG+  FE ETV V + GDLFLESP
Sbjct: 873  VHVYKLVAADSPEEEDHNTCFKKELISKMWFEWNEYCGNHEFEAETVNVSDSGDLFLESP 932

Query: 182  LLGEDVKALYKR 217
            LL EDV  LYKR
Sbjct: 933  LLREDVTVLYKR 944


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