BLASTX nr result

ID: Glycyrrhiza24_contig00028658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028658
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glyci...   197   6e-49
ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glyci...   197   7e-49
ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatu...   196   2e-48
ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-48
ref|XP_004156556.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-lik...   192   3e-47

>ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1723

 Score =  197 bits (502), Expect = 6e-49
 Identities = 104/112 (92%), Positives = 108/112 (96%)
 Frame = +1

Query: 1    SRIIVRDSGTVSSMLTRDSIKKITLALGQNSSFCRGFDKILNMLLASLRENSPVIRAKAL 180
            S+IIVRDSGTVSS+LTRDSIKKIT ALGQNSSFCRGFDKIL+ LLASL ENSPVIRAKAL
Sbjct: 757  SKIIVRDSGTVSSILTRDSIKKITSALGQNSSFCRGFDKILHTLLASLMENSPVIRAKAL 816

Query: 181  RAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDV 336
            +AVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHP V
Sbjct: 817  KAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPGV 868


>ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1655

 Score =  197 bits (501), Expect = 7e-49
 Identities = 103/112 (91%), Positives = 108/112 (96%)
 Frame = +1

Query: 1    SRIIVRDSGTVSSMLTRDSIKKITLALGQNSSFCRGFDKILNMLLASLRENSPVIRAKAL 180
            S+IIVRDS TVSS+LTRDS+KKIT ALGQNSSFCRGFDKIL+ LLASLRENSPVIRAKAL
Sbjct: 790  SKIIVRDSSTVSSILTRDSVKKITSALGQNSSFCRGFDKILHTLLASLRENSPVIRAKAL 849

Query: 181  RAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDV 336
            +AVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHP V
Sbjct: 850  KAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPGV 901


>ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatula]
            gi|355493734|gb|AES74937.1| Sister chromatid cohesion
            [Medicago truncatula]
          Length = 1167

 Score =  196 bits (497), Expect = 2e-48
 Identities = 102/112 (91%), Positives = 107/112 (95%)
 Frame = +1

Query: 1    SRIIVRDSGTVSSMLTRDSIKKITLALGQNSSFCRGFDKILNMLLASLRENSPVIRAKAL 180
            SR IVRDSG+VSSMLTRDSIKKITLALGQNSSFCRGFDKI + LL SL+ENSPVIRAKAL
Sbjct: 809  SRTIVRDSGSVSSMLTRDSIKKITLALGQNSSFCRGFDKIFHTLLVSLKENSPVIRAKAL 868

Query: 181  RAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDV 336
            RAVSIIVEADPEVLGDK VQS+VEGRFCD+AISVREAALELVGRHIASHPDV
Sbjct: 869  RAVSIIVEADPEVLGDKFVQSSVEGRFCDTAISVREAALELVGRHIASHPDV 920


>ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|222867106|gb|EEF04237.1|
            predicted protein [Populus trichocarpa]
          Length = 1815

 Score =  194 bits (494), Expect = 5e-48
 Identities = 101/112 (90%), Positives = 106/112 (94%)
 Frame = +1

Query: 1    SRIIVRDSGTVSSMLTRDSIKKITLALGQNSSFCRGFDKILNMLLASLRENSPVIRAKAL 180
            S +IVRDSGT  S+LTRDS+KKI LALGQNSSFCRGFDKIL+MLLASLRENSPVIRAKAL
Sbjct: 796  SNLIVRDSGTAFSLLTRDSVKKIALALGQNSSFCRGFDKILHMLLASLRENSPVIRAKAL 855

Query: 181  RAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDV 336
            RAVSIIVEADP+VL DKRVQ AVEGRFCDSAISVREAALELVGRHIASHPDV
Sbjct: 856  RAVSIIVEADPDVLRDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDV 907


>ref|XP_004156556.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Cucumis
            sativus]
          Length = 1819

 Score =  192 bits (487), Expect = 3e-47
 Identities = 100/112 (89%), Positives = 105/112 (93%)
 Frame = +1

Query: 1    SRIIVRDSGTVSSMLTRDSIKKITLALGQNSSFCRGFDKILNMLLASLRENSPVIRAKAL 180
            S  IVRD G  SS+LTRDS+KKITLALGQN+SF RGFDKIL+MLLASLRENSPVIRAKAL
Sbjct: 806  SMAIVRDGGNTSSLLTRDSVKKITLALGQNNSFSRGFDKILHMLLASLRENSPVIRAKAL 865

Query: 181  RAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDV 336
            RAVSIIVEADPEVLGDKRVQ AVEGRFCDSAISVREAALELVGRHIASHPD+
Sbjct: 866  RAVSIIVEADPEVLGDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDL 917


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