BLASTX nr result

ID: Glycyrrhiza24_contig00028657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028657
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   166   2e-39
ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...    99   5e-19
emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]    74   2e-11
emb|CBI22513.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  166 bits (419), Expect = 2e-39
 Identities = 91/129 (70%), Positives = 101/129 (78%), Gaps = 2/129 (1%)
 Frame = -3

Query: 383 RLLSWVPYQLDQLPNNQPKLSAFFSLKSGKMSEDAFTNALCQVESDIEDSSTRVGK--SE 210
           RLLSWVPYQLDQL NNQPKLSAFF+LKS KMSEDA+TN LCQV SDIEDSS RVG+  SE
Sbjct: 166 RLLSWVPYQLDQLANNQPKLSAFFTLKSSKMSEDAYTNDLCQVVSDIEDSSMRVGRSDSE 225

Query: 209 DKHSSKDGEMIDLSRQTSAKSDDIVSENTNAITMEEPTSVGVKCDEEELAGRSNDAAEDE 30
           D+HSSK G+M +LS Q S +SDD + ENTNAI MEE TSV       E AG SN A +DE
Sbjct: 226 DRHSSKVGDMSELSGQISTESDDTIPENTNAIMMEELTSV------REHAGGSNAATKDE 279

Query: 29  RYVQGELEP 3
           R V+GELEP
Sbjct: 280 RNVKGELEP 288


>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 3/129 (2%)
 Frame = -3

Query: 383 RLLSWVPYQLDQLPN---NQPKLSAFFSLKSGKMSEDAFTNALCQVESDIEDSSTRVGKS 213
           +LLSW+PYQLDQL N   NQPKLSAFF+LKS  + EDA T+    +  + EDS  + G S
Sbjct: 177 KLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVTHTTYPLVPETEDSVFKGGTS 236

Query: 212 EDKHSSKDGEMIDLSRQTSAKSDDIVSENTNAITMEEPTSVGVKCDEEELAGRSNDAAED 33
           +D  SS+ G+ ++ +RQ+S + DD   ENTN   +E+P S   K  E ++  +S    E+
Sbjct: 237 KDAVSSEGGQYLEYTRQSSGEIDDHQCENTNETIIEKPFSNDEKSSEIKMEEQSFSNQEE 296

Query: 32  ERYVQGELE 6
           E  ++ EL+
Sbjct: 297 ECSIKNELQ 305


>emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]
          Length = 500

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
 Frame = -3

Query: 383 RLLSWVPYQLDQLPN---NQPKLSAFFSLKSGKMSEDAFTNALCQVESDIEDSSTRVGKS 213
           +LLSW+PYQLDQL N   NQPKLSAFF+LKS  + EDA T+    +  + EDS  + G S
Sbjct: 177 KLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVTHTTYPLVPETEDSVFKGGTS 236

Query: 212 EDKHSSKDGEMIDLSRQTSAKSDDIVSENTNAITMEEPTSV 90
           +D  SS+ G+ ++ +RQ        V    N    ++P +V
Sbjct: 237 KDAVSSEGGQYLEYTRQFKIAFLSPVVIRXNPELQDKPVAV 277


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
 Frame = -3

Query: 383 RLLSWVPYQLDQLPN---NQPKLSAFFSLKSGKMSEDAFTNALCQVESDIEDSSTRVGKS 213
           +LLSW+PYQLDQL N   NQPKLSAFF+LKS  + EDA T+    +  + EDS       
Sbjct: 177 KLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVTHTTYPLVPETEDSV------ 230

Query: 212 EDKHSSKDGEMIDLSRQTSAKSDDIVSENTNAITMEEPTSVGVKCDEEELAGRSNDAAED 33
                           Q+S + DD   ENTN   +E+P S   K  E ++  +S    E+
Sbjct: 231 ----------------QSSGEIDDHQCENTNETIIEKPFSNDEKSSEIKMEEQSFSNQEE 274

Query: 32  ERYVQGELE 6
           E  ++ EL+
Sbjct: 275 ECSIKNELQ 283


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
           predicted protein [Populus trichocarpa]
          Length = 1191

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = -3

Query: 383 RLLSWVPYQLDQLPNNQPKLSAFFSLKSGKMSEDAFTNALCQVESDIEDSSTRVGKSEDK 204
           +LL+W PYQL+QL NNQPKLSAFF+LKS  + E+  T+ +CQV     D   + G ++D 
Sbjct: 172 KLLNWFPYQLNQLANNQPKLSAFFTLKSNPVPENVLTDEVCQVNL---DPILKGGTTKDV 228

Query: 203 HSSKDGEMIDLSRQTSAKSDD 141
           + S+  E +  + Q     DD
Sbjct: 229 YISEVDEPVRFAEQAGELLDD 249


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