BLASTX nr result

ID: Glycyrrhiza24_contig00028643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028643
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609674.1| Translocase of chloroplast [Medicago truncat...    78   7e-13

>ref|XP_003609674.1| Translocase of chloroplast [Medicago truncatula]
           gi|355510729|gb|AES91871.1| Translocase of chloroplast
           [Medicago truncatula]
          Length = 928

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 56/146 (38%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
 Frame = +3

Query: 3   DPEAHYASQXXXXXXXXX-----DSFEGVPLRVMPFAHLSTYXXXXXXXXXXXXXXTLMF 167
           + E HYASQ                 E VPLRV PFAHLSTY                + 
Sbjct: 58  EEEPHYASQEDEEEECFELDEELPLLEQVPLRVTPFAHLSTYDDEEENEDDDEEDGGEIM 117

Query: 168 TNSLPVSQNEFTFFNDTDSDVSIEDENDVTSGGIDEEMGVDERGLGIRVACD-DGYSTVT 344
            N + V +N           + +E EN  +      ++ +D  G+GIRVACD D  +T T
Sbjct: 118 -NVVRVPEN--VVLAPRIKVLDVEKENSDSG----SDVSIDGEGIGIRVACDGDSTATAT 170

Query: 345 DSDVMSQYSQDSFDREQFGKVRVVLN 422
           DSDVMSQYS+D  + EQFGKV V  N
Sbjct: 171 DSDVMSQYSRDGLENEQFGKVSVAFN 196