BLASTX nr result

ID: Glycyrrhiza24_contig00028639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028639
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820...   198   1e-48
ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 k...   193   2e-47
gb|AFK47791.1| unknown [Lotus japonicus]                              189   6e-46
gb|AFK38763.1| unknown [Medicago truncatula]                          139   2e-32
ref|XP_003527790.1| PREDICTED: uncharacterized protein LOC100790...   120   3e-25

>ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820296 [Glycine max]
          Length = 275

 Score =  198 bits (503), Expect = 1e-48
 Identities = 102/169 (60%), Positives = 119/169 (70%), Gaps = 8/169 (4%)
 Frame = +2

Query: 2   WPHVWGQFCLCYDGQKLIAEEDYLKNYGIKDGDQLRFIRHVSNNCGXXXXXXXXXXXXHL 181
           W HVWGQFCLCYDGQKL+ E+D L+NYGIKDGDQLRFIRHV+NNC             +L
Sbjct: 98  WAHVWGQFCLCYDGQKLVTEKDNLRNYGIKDGDQLRFIRHVTNNC-CVQRKRLKKRVVYL 156

Query: 182 KQHRRSSQVNNCEPKENCXXXXXXXXXXXXXVTQNGKIKPHIEEEG--------VGKSKL 337
           KQHRRSSQV+  +PK NC              T NGKIK HIEEE         VGK+KL
Sbjct: 157 KQHRRSSQVDGYQPKGNC---DDDEIGSDDEATDNGKIKHHIEEEEEEEREEECVGKNKL 213

Query: 338 TGFIGVVFSYTPLAIVRKTTTKSRILIPSTIPRCLLGSFRKIRRIVCFG 484
            GF+G +FSYTPLA+VR+T TKS+I  P+T+P+C+LGSFRKIR IVCFG
Sbjct: 214 AGFLGELFSYTPLAVVRRTRTKSKIW-PTTMPKCILGSFRKIRSIVCFG 261


>ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula] gi|355477824|gb|AES59027.1| U11/U12 small
           nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula]
          Length = 266

 Score =  193 bits (491), Expect = 2e-47
 Identities = 95/164 (57%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
 Frame = +2

Query: 2   WPHVWGQFCLCYDGQKLIAEEDYLKNYGIKDGDQLRFIRHVSNNCGXXXXXXXXXXXXHL 181
           WPHVWGQFCLCYDGQKL+ E+DYLKNYG+KD DQL FIRH SNNCG            HL
Sbjct: 94  WPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQLHFIRHASNNCG-ARRKRSKKRVFHL 152

Query: 182 KQHRRSSQVNNCEPKENC---XXXXXXXXXXXXXVTQNGKIKPHIEEEGVGKSKLTGFIG 352
           KQHRR SQ N C+ KENC                  +N + K HIEE  V K+K+TGF+G
Sbjct: 153 KQHRRLSQANYCKQKENCDADEDDDDGDISSDEEALENAETKHHIEEVHVRKNKITGFVG 212

Query: 353 VVFSYTPLAIVRKTTTKSRILIPSTIPRCLLGSFRKIRRIVCFG 484
            + SYTPLA+VRKT  +++I  PSTI RCL+G  RKI+RIVCFG
Sbjct: 213 ELLSYTPLAVVRKTRAQNQI-FPSTISRCLIGGLRKIKRIVCFG 255


>gb|AFK47791.1| unknown [Lotus japonicus]
          Length = 269

 Score =  189 bits (479), Expect = 6e-46
 Identities = 101/166 (60%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
 Frame = +2

Query: 2   WPHVWGQFCLCYDGQKLIAEEDYLKNYGIKDGDQLRFIRHVSNNCGXXXXXXXXXXXXHL 181
           WPHVWGQFCLCYDGQKL+ EEDYL+NYGIKDGD+L F+RHVSNNC               
Sbjct: 94  WPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNCTVRRKRPKKRVLRLK 153

Query: 182 KQHR-RSSQVNNCEPKENCXXXXXXXXXXXXXVTQNGKIKPHI----EEEGVGKSKLTGF 346
           K+ R RSSQVN+CEP+ENC               +N K K  I    EEE VGK+KLTG 
Sbjct: 154 KRRRSRSSQVNSCEPEENCNDGEVSSDGEED--QENVKTKHCIGEEEEEEHVGKNKLTGI 211

Query: 347 IGVVFSYTPLAIVRKTTTKSRILIPSTIPRCLLGSFRKIRRIVCFG 484
           +G +FS TPLA+VRK  +KSR    STIPRCLLGSFRKIRRIVCFG
Sbjct: 212 VGELFSCTPLAVVRKAKSKSRSW-SSTIPRCLLGSFRKIRRIVCFG 256


>gb|AFK38763.1| unknown [Medicago truncatula]
          Length = 226

 Score =  139 bits (350), Expect(2) = 2e-32
 Identities = 67/120 (55%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
 Frame = +2

Query: 2   WPHVWGQFCLCYDGQKLIAEEDYLKNYGIKDGDQLRFIRHVSNNCGXXXXXXXXXXXXHL 181
           WPHVWGQFCLCYDGQKL+ E+DYLKNYG+KD DQL FIRH SNNCG            HL
Sbjct: 94  WPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQLHFIRHASNNCG-ARRKRSKKRVFHL 152

Query: 182 KQHRRSSQVNNCEPKENC---XXXXXXXXXXXXXVTQNGKIKPHIEEEGVGKSKLTGFIG 352
           KQHRR SQ N C+ KENC                  +N + K HIEE  V K+K+TGF+G
Sbjct: 153 KQHRRLSQANYCKQKENCDADEDDDDGDISSDEEALENAETKHHIEEVHVRKNKITGFVG 212



 Score = 25.8 bits (55), Expect(2) = 2e-32
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 325 KEQVNWLHRSGVLIHPTGNCEKN 393
           K ++       V+IH TG+CEKN
Sbjct: 204 KNKITGFVGRAVIIHTTGSCEKN 226


>ref|XP_003527790.1| PREDICTED: uncharacterized protein LOC100790105 [Glycine max]
          Length = 258

 Score =  120 bits (300), Expect = 3e-25
 Identities = 70/161 (43%), Positives = 96/161 (59%), Gaps = 3/161 (1%)
 Frame = +2

Query: 2   WPHVWGQFCLCYDGQKLIAEEDYLKNYGIKDGDQLRFIRHVSNNCGXXXXXXXXXXXXHL 181
           WP VW QFCLCY GQKL++E DY+++YGIKDGDQL F+ HVS+ C             +L
Sbjct: 86  WPLVWRQFCLCYQGQKLVSEMDYIRDYGIKDGDQLHFVYHVSDTCS-FERKQSKKRVVNL 144

Query: 182 KQH-RRSSQVNNCEPKENCXXXXXXXXXXXXXVTQNGKIK--PHIEEEGVGKSKLTGFIG 352
           KQH R SS+VN  + KE+              V +N +I+   + EE G GK  L G + 
Sbjct: 145 KQHMRSSSKVNRYQQKEH---NDDKDIDLDDIVIENARIQHCNNAEENGGGKRSLAGILA 201

Query: 353 VVFSYTPLAIVRKTTTKSRILIPSTIPRCLLGSFRKIRRIV 475
            +FS++ LA+V +   +SRI   S + R ++ SFRKIRRI+
Sbjct: 202 GLFSHSRLAVVSRARIESRICC-SMMARFIVSSFRKIRRIL 241


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