BLASTX nr result

ID: Glycyrrhiza24_contig00028630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028630
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550980.1| PREDICTED: scarecrow-like protein 32-like [G...    86   4e-15
ref|XP_003525859.1| PREDICTED: scarecrow-like protein 32-like [G...    85   5e-15
ref|XP_002304316.1| GRAS family transcription factor [Populus tr...    85   5e-15
emb|CCH47195.1| similar to GRAS family transcription factor [Lup...    82   4e-14
gb|ADL36818.1| SCL domain class transcription factor [Malus x do...    82   4e-14

>ref|XP_003550980.1| PREDICTED: scarecrow-like protein 32-like [Glycine max]
          Length = 482

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -1

Query: 212 NCHMMLHYIPDETLLSAIPDTDSIFDCNYXXXXXXXS---LRALFLKAVRGLDPTLVVLV 42
           NCHMMLHYIPDETL      T  ++D +            LR+LFLK++RGLDPT+V+LV
Sbjct: 291 NCHMMLHYIPDETLSDTTDLTSYVYDSSSSAAVSVTPTSSLRSLFLKSLRGLDPTVVILV 350

Query: 41  DEDADLTSNDLVC 3
           DEDADLTSN+LVC
Sbjct: 351 DEDADLTSNNLVC 363


>ref|XP_003525859.1| PREDICTED: scarecrow-like protein 32-like [Glycine max]
          Length = 480

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 6/76 (7%)
 Frame = -1

Query: 212 NCHMMLHYIPDETL------LSAIPDTDSIFDCNYXXXXXXXSLRALFLKAVRGLDPTLV 51
           NCHMMLHYIPDETL       S + D+ S+   +        SLR+LFLK++RGLDPT+V
Sbjct: 286 NCHMMLHYIPDETLSDTTGLTSFLYDSSSLAASSAVSVTPTSSLRSLFLKSLRGLDPTVV 345

Query: 50  VLVDEDADLTSNDLVC 3
           +LVDEDADLTSN+LVC
Sbjct: 346 ILVDEDADLTSNNLVC 361


>ref|XP_002304316.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841748|gb|EEE79295.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 451

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = -1

Query: 212 NCHMMLHYIPDETLLSAIPDTDSIFDCNYXXXXXXXSLRALFLKAVRGLDPTLVVLVDED 33
           NCHMMLHYIP+ETL S IP T+S    +Y       S R +FLK++R LDPTLVVLVDED
Sbjct: 265 NCHMMLHYIPEETL-SGIPSTNSN-TYSYESSSSSMSFRTMFLKSLRSLDPTLVVLVDED 322

Query: 32  ADLTSNDLVC 3
           ADLTSN+LVC
Sbjct: 323 ADLTSNNLVC 332


>emb|CCH47195.1| similar to GRAS family transcription factor [Lupinus angustifolius]
          Length = 445

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/70 (58%), Positives = 49/70 (70%)
 Frame = -1

Query: 212 NCHMMLHYIPDETLLSAIPDTDSIFDCNYXXXXXXXSLRALFLKAVRGLDPTLVVLVDED 33
           NCHMMLHYIPDETL   +     ++D  Y        LR+LFLK +R L+PT+VVLVDED
Sbjct: 259 NCHMMLHYIPDETLTHDMDTNSYVYDYGYHSSTLS--LRSLFLKELRSLNPTIVVLVDED 316

Query: 32  ADLTSNDLVC 3
           ADLTS +LVC
Sbjct: 317 ADLTSKNLVC 326


>gb|ADL36818.1| SCL domain class transcription factor [Malus x domestica]
          Length = 450

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 47/79 (59%), Positives = 53/79 (67%), Gaps = 9/79 (11%)
 Frame = -1

Query: 212 NCHMMLHYIPDETLL--------SAIPDTDSI-FDCNYXXXXXXXSLRALFLKAVRGLDP 60
           NCHMMLHYIP+ETL         S+   T S  FD          SLR +FLKA+RGLDP
Sbjct: 253 NCHMMLHYIPEETLTLPSINLNPSSSGSTSSYAFDVASSSSSTTPSLRTMFLKALRGLDP 312

Query: 59  TLVVLVDEDADLTSNDLVC 3
           T+VVLVDEDADLTSN+LVC
Sbjct: 313 TIVVLVDEDADLTSNNLVC 331


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