BLASTX nr result

ID: Glycyrrhiza24_contig00028627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028627
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   243   9e-63
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   239   1e-61
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   208   3e-52
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   205   4e-51

>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  243 bits (621), Expect = 9e-63
 Identities = 125/151 (82%), Positives = 134/151 (88%), Gaps = 4/151 (2%)
 Frame = -2

Query: 443 LPAADECFYVRD----TGTTSLGSDQAKLLRKKLDIRVKGDVVAPVLSFTSCNLPDKLLH 276
           +PAADECFYVRD    +GT S+GSD    LRKKLDIRVKGDVVAPVLSF++CNLPDKLLH
Sbjct: 86  IPAADECFYVRDSDFKSGTVSMGSD----LRKKLDIRVKGDVVAPVLSFSACNLPDKLLH 141

Query: 275 NIEAAGYDMPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLTFVSDK 96
           NIEAAGY+MPTPVQMQ IPAAL GK+MLVLADTGSGKSASFLIPIVSRC  HR  + S K
Sbjct: 142 NIEAAGYEMPTPVQMQAIPAALTGKSMLVLADTGSGKSASFLIPIVSRCVIHRRQYFSGK 201

Query: 95  KQPLAMVLTPTRELCIQVEEHAKLLGKGLPF 3
           K+PLAMVLTPTRELCIQVEEHAKLLGKGLPF
Sbjct: 202 KKPLAMVLTPTRELCIQVEEHAKLLGKGLPF 232


>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  239 bits (611), Expect = 1e-61
 Identities = 121/151 (80%), Positives = 134/151 (88%), Gaps = 4/151 (2%)
 Frame = -2

Query: 443 LPAADECFYVRD----TGTTSLGSDQAKLLRKKLDIRVKGDVVAPVLSFTSCNLPDKLLH 276
           +PAADECFYV+D    +GT S+ SD    LRKKLDI VKGDVVAPVLSF++CNLPDKLLH
Sbjct: 86  IPAADECFYVKDADYESGTASMASD----LRKKLDIHVKGDVVAPVLSFSACNLPDKLLH 141

Query: 275 NIEAAGYDMPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLTFVSDK 96
           NIEAAGY+MPTPVQMQ IPAAL GK+ML+LADTGSGKSASFLIPIVSRCA HR  +VSDK
Sbjct: 142 NIEAAGYEMPTPVQMQAIPAALTGKSMLLLADTGSGKSASFLIPIVSRCAIHRRQYVSDK 201

Query: 95  KQPLAMVLTPTRELCIQVEEHAKLLGKGLPF 3
           K PLA+VLTPTRELC+QVEEHAKLLGKG+PF
Sbjct: 202 KNPLALVLTPTRELCMQVEEHAKLLGKGMPF 232


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 514

 Score =  208 bits (530), Expect = 3e-52
 Identities = 104/148 (70%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443 LPAADECFYVRDTGTTSLGSDQAKLLRKKLDIRVKGDVVA-PVLSFTSCNLPDKLLHNIE 267
           L A DECFYVR+ GT+SL +DQ +LLR+ L+I VKG++V  P+LSF+SCNLP KLL N+E
Sbjct: 77  LAATDECFYVRENGTSSLTNDQTELLRRTLEIHVKGELVPDPILSFSSCNLPQKLLLNLE 136

Query: 266 AAGYDMPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLTFVSDKKQP 87
           AAGYD+PTPVQMQ IP AL GK++L  ADTGSGK+AS+L+PI+S CAS+RL   SD+K P
Sbjct: 137 AAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYLVPIISSCASYRLQHSSDRK-P 195

Query: 86  LAMVLTPTRELCIQVEEHAKLLGKGLPF 3
           LAMVLTPTRELCIQVE+ AKL GKGLPF
Sbjct: 196 LAMVLTPTRELCIQVEDQAKLFGKGLPF 223


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  206 bits (524), Expect = 2e-51
 Identities = 105/148 (70%), Positives = 123/148 (83%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443 LPAADECFYVRDTGTTSLGSDQAKLLRKKLDIRVKGDVVA-PVLSFTSCNLPDKLLHNIE 267
           L A DECFYVRD+  + L SDQ +LLR+KL+I VKGD V  P+LSF+SCNLP+KLLHNI+
Sbjct: 82  LAATDECFYVRDS-ESPLTSDQTELLRRKLEIHVKGDSVPDPILSFSSCNLPEKLLHNIQ 140

Query: 266 AAGYDMPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLTFVSDKKQP 87
             GYDMPTP+QMQ I AAL GK++L  ADTGSGK+ASFL+P+VSRCA+ R   +S  K+P
Sbjct: 141 TLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSRCATFRHGNISKSKKP 200

Query: 86  LAMVLTPTRELCIQVEEHAKLLGKGLPF 3
           LAMVLTPTRELCIQVEE AKLLGKGLPF
Sbjct: 201 LAMVLTPTRELCIQVEEQAKLLGKGLPF 228


>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  205 bits (521), Expect = 4e-51
 Identities = 104/152 (68%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
 Frame = -2

Query: 443 LPAADECFYVRDTG----TTSLGSDQAKLLRKKLDIRVKGDV-VAPVLSFTSCNLPDKLL 279
           LP  DECFYVRD+G    + SL   Q ++LR++L+I V+GD  ++P+LSF+SCNLP KLL
Sbjct: 90  LPTTDECFYVRDSGDKSGSQSLTGSQTEMLRRRLEICVRGDFDLSPILSFSSCNLPQKLL 149

Query: 278 HNIEAAGYDMPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLTFVSD 99
            NIEAAGY++PTPVQMQ IPAAL+GKN+LV ADTGSGK+ASFL+PIVSRC S R     +
Sbjct: 150 QNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGSGKTASFLVPIVSRCTSIRPDHSPN 209

Query: 98  KKQPLAMVLTPTRELCIQVEEHAKLLGKGLPF 3
           +K PLAMVLTPTRELC+QVEE AKLLGKGLPF
Sbjct: 210 QKNPLAMVLTPTRELCMQVEEQAKLLGKGLPF 241


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