BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028626
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               122   2e-27
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    99   2e-19
ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group] g...    59   5e-07
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...    57   2e-06
ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group] g...    55   5e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  122 bits (305), Expect(2) = 2e-27
 Identities = 60/79 (75%), Positives = 73/79 (92%), Gaps = 1/79 (1%)
 Frame = -1

Query: 234 GLYMLDELRV-LDVAASTIDLSSFRLNLASSSFYLWHSRLGHISSSRLKYLASSGALGKL 58
           GLY+LDEL+V + VAA+T+DLS FRL+L+SSSFYLWHSRLGH+SSSRL++LAS+GALG L
Sbjct: 446 GLYILDELKVPVVVAATTVDLSFFRLSLSSSSFYLWHSRLGHVSSSRLRFLASTGALGNL 505

Query: 57  KTSEISDCCGCKLAKFTAL 1
           KT +ISDC GCKLAKF+AL
Sbjct: 506 KTCDISDCSGCKLAKFSAL 524



 Score = 25.0 bits (53), Expect(2) = 2e-27
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -2

Query: 281 KDPQSRRLIGTGRRQ 237
           +D QS++LIGTGRR+
Sbjct: 430 QDLQSQKLIGTGRRE 444


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 98.6 bits (244), Expect(2) = 2e-19
 Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
 Frame = -1

Query: 234 GLYMLDELR---VLDVAASTIDLSSFRLNLASSSFYLWHSRLGHISSSRLKYLASSGALG 64
           GLY++DELR   V ++AA ++DLSSF L  +SS FY WHSRLGHIS+  LKYL S G LG
Sbjct: 344 GLYVMDELRLPRVSNLAALSVDLSSFHLTSSSSXFYSWHSRLGHISAPHLKYLISKGFLG 403

Query: 63  KLKTSEISDCCGCKLAKFTAL 1
             +T +IS C GCKLAKF+AL
Sbjct: 404 NFQTHDISYCSGCKLAKFSAL 424



 Score = 21.6 bits (44), Expect(2) = 2e-19
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 275 PQSRRLIGTGRRQ 237
           P S+ LIG GRRQ
Sbjct: 330 PXSQXLIGXGRRQ 342


>ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group]
           gi|255677175|dbj|BAH93597.1| Os06g0583500, partial
           [Oryza sativa Japonica Group]
          Length = 174

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = -1

Query: 237 GGLYMLDELRVLDVAASTIDLSSFRLNLASSS-FYLWHSRLGHISSSRLKYLASSGALGK 61
           G LY+LD L +   +  +   SS  L  ASS+ F  WH RLGH+  SRL  L   G LG 
Sbjct: 34  GKLYVLDHLSLPPSSFGSTTTSSTALGYASSTTFPQWHHRLGHLCGSRLSTLIRQGVLGH 93

Query: 60  LKTSEISDCCGCKLAK 13
           +      DC GCKL K
Sbjct: 94  VSIDTTFDCTGCKLGK 109


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group] gi|78708691|gb|ABB47666.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/74 (40%), Positives = 39/74 (52%)
 Frame = -1

Query: 234 GLYMLDELRVLDVAASTIDLSSFRLNLASSSFYLWHSRLGHISSSRLKYLASSGALGKLK 55
           GLY+LD L +   + +T  + S   + A  SF  WH RLGH+  SRL  L + G LG + 
Sbjct: 291 GLYILDSLSLPSSSTNTPSVYSPMCSTACKSFPQWHHRLGHLCGSRLATLINQGVLGSVP 350

Query: 54  TSEISDCCGCKLAK 13
                 C GCKL K
Sbjct: 351 VDTTFVCKGCKLGK 364


>ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group]
           gi|255677790|dbj|BAH93941.1| Os07g0500000 [Oryza sativa
           Japonica Group]
          Length = 662

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/76 (39%), Positives = 40/76 (52%)
 Frame = -1

Query: 240 TGGLYMLDELRVLDVAASTIDLSSFRLNLASSSFYLWHSRLGHISSSRLKYLASSGALGK 61
           + GLY+LD L +   +  T  ++S   + A  SF  WH RLGH+  SRL  L + G LG 
Sbjct: 174 SSGLYILDNLNMPSSSTGTPIVTSPVCSSACKSFPQWHHRLGHLRGSRLATLVNQGVLGP 233

Query: 60  LKTSEISDCCGCKLAK 13
           +       C GCKL K
Sbjct: 234 VSIDTNFICKGCKLGK 249