BLASTX nr result

ID: Glycyrrhiza24_contig00028617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028617
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycin...    71   1e-10
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis...    59   5e-07
ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like p...    58   7e-07
ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumi...    58   7e-07
ref|XP_002527323.1| double-stranded RNA binding protein, putativ...    57   1e-06

>ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 194

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +1

Query: 1   RMFTFKVIVEIDEASENIIECYGAPHQRKKTAADHAAEGAL 123
           RMFTFKVI+EI EAS NIIECYGAPH +KK AADHAAEGAL
Sbjct: 138 RMFTFKVIIEI-EASRNIIECYGAPHGKKKAAADHAAEGAL 177


>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
            gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1633

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = +1

Query: 1    RMFTFKVIVEIDEASENIIECYGAPHQRKKTAADHAAEGAL 123
            + F++KVIVEI+ A + I+EC+GAP ++KK AA+HAAEGAL
Sbjct: 1581 KSFSYKVIVEIEAAPDMILECFGAPREKKKAAAEHAAEGAL 1621


>ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
            sativus]
          Length = 1228

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 1    RMFTFKVIVEIDEASENIIECYGAPHQRKKTAADHAAEGAL 123
            +MFT+KV++EI+EA + I E +GAPH +KK AA+HAAE AL
Sbjct: 1169 KMFTYKVVLEIEEAPDTIFEFFGAPHLKKKAAAEHAAEAAL 1209


>ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
          Length = 1657

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 1    RMFTFKVIVEIDEASENIIECYGAPHQRKKTAADHAAEGAL 123
            +MFT+KV++EI+EA + I E +GAPH +KK AA+HAAE AL
Sbjct: 1598 KMFTYKVVLEIEEAPDTIFEFFGAPHLKKKAAAEHAAEAAL 1638


>ref|XP_002527323.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223533323|gb|EEF35075.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 219

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   RMFTFKVIVEIDEASENIIECYGAPHQRKKTAADHAAEGAL 123
           R+FTFKVIVE+  A   ++ECYG P  +KKTAA+HAAEGAL
Sbjct: 160 RLFTFKVIVEMIGAEYIVLECYGIPKIKKKTAAEHAAEGAL 200


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