BLASTX nr result

ID: Glycyrrhiza24_contig00028613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028613
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    78   8e-13
gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis ...    74   1e-11
ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis tha...    74   1e-11
ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arab...    72   4e-11
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...    72   5e-11

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = -3

Query: 182 GHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPKCCSNEELSEPI 12
           G+DG YF C +C+  G L+ C++CPR YH++CL+  LK +P  +WQCPKCC   +  EP+
Sbjct: 70  GNDGYYFECVICDLGGNLLCCDSCPRTYHLQCLNPPLKRIPNGKWQCPKCCQKSDSLEPM 129

Query: 11  KHL 3
            HL
Sbjct: 130 SHL 132


>gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana]
           gi|9758384|dbj|BAB08833.1| helicase-like protein
           [Arabidopsis thaliana]
          Length = 2228

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -3

Query: 215 SVPRTDGSHEIGHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPK 45
           S P  + S   G+DG YF C +C+  G+L+ C++CPR YH  CL+  LK +P  +W CPK
Sbjct: 45  STPERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPK 104

Query: 44  CCSNEELSEPIKHL 3
           C  N E  +P+  L
Sbjct: 105 CSPNSEALKPVNRL 118


>ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis thaliana]
           gi|332007781|gb|AED95164.1| chromatin remodeling 4
           protein [Arabidopsis thaliana]
          Length = 2223

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -3

Query: 215 SVPRTDGSHEIGHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPK 45
           S P  + S   G+DG YF C +C+  G+L+ C++CPR YH  CL+  LK +P  +W CPK
Sbjct: 59  STPERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPK 118

Query: 44  CCSNEELSEPIKHL 3
           C  N E  +P+  L
Sbjct: 119 CSPNSEALKPVNRL 132


>ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
           lyrata] gi|297309379|gb|EFH39803.1| hypothetical protein
           ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata]
          Length = 2251

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
 Frame = -3

Query: 209 PRTDGSHEIGHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPKCC 39
           P  + S   G+DG YF C +C+  G+L+ C++CPR YH  CL+  LK +P  +W CPKC 
Sbjct: 61  PERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPKCS 120

Query: 38  SNEELSEPIKHL 3
            N E  +P+  L
Sbjct: 121 PNSEALKPVNRL 132


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -3

Query: 194 SHEIGHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPKCCSNEEL 24
           S + G+DG Y+ C +C+  G L+ C++CPR YH++CLD  LK +P  +WQCP C   ++ 
Sbjct: 61  SKKKGNDGYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGKDQ 120

Query: 23  SEPIKHL 3
             PI HL
Sbjct: 121 RMPINHL 127


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