BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028611
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
gb|ACU21163.1| unknown [Glycine max]                                  209   2e-52
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   187   6e-46
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46

>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Glycine max]
          Length = 526

 Score =  209 bits (532), Expect = 2e-52
 Identities = 100/114 (87%), Positives = 107/114 (93%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           SSKLLRLY+S GY+D+AHDLFDQM KRD SAFPWNSLISGYAQ+G YD+AIALYFQMVEE
Sbjct: 128 SSKLLRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEE 187

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYSKC 2
           GVE DLFTFPRVLKVCAGIGSVQVGEEVHRHA+R GFA DGF+LNALVDMYSKC
Sbjct: 188 GVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKC 241



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/109 (33%), Positives = 62/109 (56%)
 Frame = -3

Query: 334 LLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 155
           L+ +YS  G + +A  +FD+MP RD  +  WNS+++ Y   GL   A+ ++ QM+ EG E
Sbjct: 234 LVDMYSKCGDIVKARKVFDKMPHRDPVS--WNSMLTAYVHHGLEVQAMNIFRQMLLEGCE 291

Query: 154 PDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYS 8
           PD  +   VL    G+ S+ +G ++H   +  G   +  + N+L+ MYS
Sbjct: 292 PDSVSISTVL---TGVSSLGLGVQIHGWVISQGHEWNLSIANSLIMMYS 337



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/96 (35%), Positives = 60/96 (62%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           ++ L+ +YS++G +++A  +F+ MP+RD  +  WNS+IS + +     +A+A + QM   
Sbjct: 329 ANSLIMMYSNHGRLEKARWVFNLMPERDVVS--WNSIISAHCKRR---EALAFFEQMEGA 383

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCG 56
           GV+PD  TF  +L  CA +G ++ GE +   A+ CG
Sbjct: 384 GVQPDKITFVSILSACAYLGLLKDGERL--FALMCG 417


>gb|ACU21163.1| unknown [Glycine max]
          Length = 481

 Score =  209 bits (532), Expect = 2e-52
 Identities = 100/114 (87%), Positives = 107/114 (93%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           SSKLLRLY+S GY+D+AHDLFDQM KRD SAFPWNSLISGYAQ+G YD+AIALYFQMVEE
Sbjct: 128 SSKLLRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEE 187

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYSKC 2
           GVE DLFTFPRVLKVCAGIGSVQVGEEVHRHA+R GFA DGF+LNALVDMYSKC
Sbjct: 188 GVEADLFTFPRVLKVCAGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKC 241



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/109 (33%), Positives = 62/109 (56%)
 Frame = -3

Query: 334 LLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 155
           L+ +YS  G + +A  +FD+MP RD  +  WNS+++ Y   GL   A+ ++ QM+ EG E
Sbjct: 234 LVDMYSKCGDIVKARKVFDKMPHRDPVS--WNSMLTAYVHHGLEVQAMNIFRQMLLEGCE 291

Query: 154 PDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYS 8
           PD  +   VL    G+ S+ +G ++H   +  G   +  + N+L+ MYS
Sbjct: 292 PDSVSISTVL---TGVSSLGLGVQIHGWVISQGHEWNLSIANSLIMMYS 337



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/96 (35%), Positives = 60/96 (62%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           ++ L+ +YS++G +++A  +F+ MP+RD  +  WNS+IS + +     +A+A + QM   
Sbjct: 329 ANSLIMMYSNHGRLEKARWVFNLMPERDVVS--WNSIISAHCKRR---EALAFFEQMEGA 383

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCG 56
           GV+PD  TF  +L  CA +G ++ GE +   A+ CG
Sbjct: 384 GVQPDKITFVSILSACAYLGLLKDGERL--FALMCG 417


>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/114 (79%), Positives = 101/114 (88%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           SSKLLRLY+S G ++EAH LFDQM +R+ SAF WNSLISGYA+LGLY+DA+ALYFQM EE
Sbjct: 117 SSKLLRLYASIGRIEEAHRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQMEEE 176

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYSKC 2
           GV PD FTFPRVLK C GIGS+ VGEEVHRH VRCGFADDGFVLNALVDMY+KC
Sbjct: 177 GVVPDRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKC 230



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/86 (39%), Positives = 53/86 (61%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           ++ L+ LYS++G +D+A  LFD MP+RD  +  WNS+IS + +      AI  + +M + 
Sbjct: 318 ANSLIVLYSNHGKLDQACWLFDHMPERDVVS--WNSIISAHRK---DLKAITYFSRMQKA 372

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGE 86
            V PD+ TF  +L  CA +G V+ GE
Sbjct: 373 DVLPDVVTFVSLLSACAHLGLVKDGE 398



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/109 (28%), Positives = 65/109 (59%)
 Frame = -3

Query: 334 LLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 155
           L+ +Y+  G + +A  +FD++  RD+ +  WNS+++GY + GL   A++++ +M++ G E
Sbjct: 223 LVDMYAKCGDIVKARKVFDKIVCRDSVS--WNSMLTGYIRHGLPLQALSIFRRMLQYGFE 280

Query: 154 PDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYS 8
           PD      +  V  G+ S+++  ++H   +R G   +  + N+L+ +YS
Sbjct: 281 PDAVA---ISTVVTGVPSLKLAGQIHGWVLRRGVQWNLSIANSLIVLYS 326


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  187 bits (476), Expect = 6e-46
 Identities = 88/114 (77%), Positives = 100/114 (87%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           SSKLLRLY+S+GYM++AH +FD+M  R+ SAF WNSLISGYA+LGLY+DA+ALYFQM EE
Sbjct: 92  SSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEE 151

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYSKC 2
           GVEPD FTFPRVLK C GIGS+Q+GE VHRH VR GFA D FVLNALVDMYSKC
Sbjct: 152 GVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKC 205



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/111 (32%), Positives = 65/111 (58%)
 Frame = -3

Query: 334 LLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 155
           L+ +YS  G +  A  +FDQ+  +D  +  WNS+++GY + GL+ +A+ ++ QM++EG E
Sbjct: 198 LVDMYSKCGCIVRARKVFDQIEYKDIVS--WNSMLTGYTRHGLHFEALDIFDQMIQEGYE 255

Query: 154 PDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYSKC 2
           PD      +L   + I S++    +H   +R G   +  + N+L+ MY+KC
Sbjct: 256 PDSVALSTLL---SNISSMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKC 303



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIAL-YFQMVE 167
           ++ L+ +Y+  G ++ A  LF QMP++D  +  WNS+IS +     ++ A AL YF+++E
Sbjct: 293 ANSLIVMYAKCGKLNRAKWLFQQMPQKDMVS--WNSIISAH-----FNSAEALTYFEVME 345

Query: 166 E-GVEPDLFTFPRVLKVCAGIGSVQVGEEVH 77
             GV PD  TF  +L  CA +G V+ G E++
Sbjct: 346 SLGVSPDGVTFVSLLSTCAHLGLVKEGXELY 376


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  187 bits (476), Expect = 6e-46
 Identities = 88/114 (77%), Positives = 100/114 (87%)
 Frame = -3

Query: 343 SSKLLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 164
           SSKLLRLY+S+GYM++AH +FD+M  R+ SAF WNSLISGYA+LGLY+DA+ALYFQM EE
Sbjct: 92  SSKLLRLYASFGYMEDAHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEE 151

Query: 163 GVEPDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYSKC 2
           GVEPD FTFPRVLK C GIGS+Q+GE VHRH VR GFA D FVLNALVDMYSKC
Sbjct: 152 GVEPDNFTFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKC 205



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/111 (32%), Positives = 65/111 (58%)
 Frame = -3

Query: 334 LLRLYSSYGYMDEAHDLFDQMPKRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 155
           L+ +YS  G +  A  +FDQ+  +D  +  WNS+++GY + GL+ +A+ ++ QM++EG E
Sbjct: 198 LVDMYSKCGCIVRARKVFDQIEYKDIVS--WNSMLTGYTRHGLHFEALDIFDQMIQEGYE 255

Query: 154 PDLFTFPRVLKVCAGIGSVQVGEEVHRHAVRCGFADDGFVLNALVDMYSKC 2
           PD      +L   + I S++    +H   +R G   +  + N+L+ MY+KC
Sbjct: 256 PDSVALSTLL---SNISSMKFKLHIHGWVIRHGVEWNLSIANSLIVMYAKC 303