BLASTX nr result

ID: Glycyrrhiza24_contig00028595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028595
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l...   105   3e-21
ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-l...   103   2e-20
ref|XP_003600881.1| ABC transporter like protein [Medicago trunc...    98   8e-19
ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i...    79   3e-13
ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i...    79   3e-13

>ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/61 (81%), Positives = 58/61 (95%)
 Frame = +3

Query: 3   FIIGKVSSEAVIEAKMSQSKSLVTWFNVKLDKILLEIRLWRMQMALWILQVRKALSWSHQ 182
           F+IGKVSSEAVIEAKM QSKSL+TW NVKLDKILLE+RLW MQ+ALW+LQ+RK+LSWS+Q
Sbjct: 480 FVIGKVSSEAVIEAKMLQSKSLLTWLNVKLDKILLEVRLWGMQVALWLLQLRKSLSWSNQ 539

Query: 183 A 185
           A
Sbjct: 540 A 540


>ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/61 (78%), Positives = 57/61 (93%)
 Frame = +3

Query: 3   FIIGKVSSEAVIEAKMSQSKSLVTWFNVKLDKILLEIRLWRMQMALWILQVRKALSWSHQ 182
           F+IGKVSSEAVIEAKM QSKSL+TW N+KLDKILLE+RLW MQ+ALW+LQ+RK+LSW +Q
Sbjct: 480 FVIGKVSSEAVIEAKMLQSKSLLTWLNIKLDKILLEVRLWGMQVALWLLQLRKSLSWYNQ 539

Query: 183 A 185
           A
Sbjct: 540 A 540


>ref|XP_003600881.1| ABC transporter like protein [Medicago truncatula]
           gi|355489929|gb|AES71132.1| ABC transporter like protein
           [Medicago truncatula]
          Length = 657

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/59 (76%), Positives = 55/59 (93%)
 Frame = +3

Query: 6   IIGKVSSEAVIEAKMSQSKSLVTWFNVKLDKILLEIRLWRMQMALWILQVRKALSWSHQ 182
           IIGKVSSEAVI+A+ SQSKS++TWF++K DKILLEI+LW+MQM LW+LQVRKAL WSH+
Sbjct: 529 IIGKVSSEAVIDARRSQSKSVLTWFSIKWDKILLEIQLWKMQMFLWLLQVRKALPWSHR 587


>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis
           vinifera]
          Length = 549

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/56 (69%), Positives = 47/56 (83%)
 Frame = +3

Query: 6   IIGKVSSEAVIEAKMSQSKSLVTWFNVKLDKILLEIRLWRMQMALWILQVRKALSW 173
           IIGKV+SEAV EAKMSQ +S + W NV L+ ILLE RL+ MQ+ALW+LQVRKAL+W
Sbjct: 494 IIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGMQIALWLLQVRKALTW 549


>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis
           vinifera] gi|297736618|emb|CBI25489.3| unnamed protein
           product [Vitis vinifera]
          Length = 538

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/56 (69%), Positives = 47/56 (83%)
 Frame = +3

Query: 6   IIGKVSSEAVIEAKMSQSKSLVTWFNVKLDKILLEIRLWRMQMALWILQVRKALSW 173
           IIGKV+SEAV EAKMSQ +S + W NV L+ ILLE RL+ MQ+ALW+LQVRKAL+W
Sbjct: 483 IIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGMQIALWLLQVRKALTW 538


Top