BLASTX nr result

ID: Glycyrrhiza24_contig00028587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028587
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD55482.1|AC009322_22 Hypothetical protein [Arabidopsis thal...    62   5e-08
ref|XP_002325202.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002332735.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|AAD39658.1|AC007591_23 Similar to gi|22113 Ac transposase (OR...    58   7e-07

>gb|AAD55482.1|AC009322_22 Hypothetical protein [Arabidopsis thaliana]
            gi|12324573|gb|AAG52234.1|AC011717_2 hypothetical
            protein; 281-3511 [Arabidopsis thaliana]
          Length = 1076

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = -3

Query: 256  SADSVFDTEIRKMDSYRSSLDSLTLEALICTKDWFQDESLPIDDSNEL 113
            S DSVFDTE++KMD+YRSSL  +TLEAL C KDWF+  S      N L
Sbjct: 1025 SPDSVFDTEVKKMDNYRSSLRHVTLEALFCAKDWFKHSSSNSTSENNL 1072


>ref|XP_002325202.1| predicted protein [Populus trichocarpa] gi|222866636|gb|EEF03767.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -3

Query: 250 DSVFDTEIRKMDSYRSSLDSLTLEALICTKDWFQ-DESLPIDDSNELVKV 104
           DSVFDTEI+++DSYRSSL   T+EAL+C KDW Q   + P + SN +VKV
Sbjct: 615 DSVFDTEIKELDSYRSSLRPETVEALVCAKDWLQYGSAAPAEISNAIVKV 664


>ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|222839683|gb|EEE78006.1|
            predicted protein [Populus trichocarpa]
          Length = 1099

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
 Frame = -3

Query: 250  DSVFDTEIRKMDSYRSSLDSLTLEALICTKDWFQD----ESLPIDDSNELVKVEY 98
            DSVFDTE RK+DSYR SL  +TLEAL+C KDW Q      S  ++ SN LVK E+
Sbjct: 1045 DSVFDTENRKIDSYRGSLLPITLEALVCAKDWLQHGSSLSSSSLEISNALVKKEF 1099


>ref|XP_002332735.1| predicted protein [Populus trichocarpa] gi|222833157|gb|EEE71634.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -3

Query: 250 DSVFDTEIRKMDSYRSSLDSLTLEALICTKDWFQDESLPIDDSNELVKVE 101
           DSVFDTEI+++D YRSSL   T+EAL+C KDW Q  S   + SN LVKVE
Sbjct: 591 DSVFDTEIKELDEYRSSLRPETVEALVCAKDWLQYRS-ATEVSNALVKVE 639


>gb|AAD39658.1|AC007591_23 Similar to gi|22113 Ac transposase (ORFa) from Zea mays transcript
           gb|X05424 [Arabidopsis thaliana]
           gi|20260646|gb|AAM13221.1| similar to Ac transposase
           [Arabidopsis thaliana] gi|34098823|gb|AAQ56794.1|
           At1g15300 [Arabidopsis thaliana]
          Length = 799

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/40 (62%), Positives = 34/40 (85%)
 Frame = -3

Query: 256 SADSVFDTEIRKMDSYRSSLDSLTLEALICTKDWFQDESL 137
           S DSVFDTE+++MD+YR+SL   TLEAL+CTKDW ++ +L
Sbjct: 760 SPDSVFDTEVKQMDNYRTSLPGETLEALLCTKDWLKNGTL 799


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