BLASTX nr result

ID: Glycyrrhiza24_contig00028579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028579
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein lig...   120   1e-25
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...   119   3e-25
ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein lig...   116   2e-24
ref|XP_003546114.1| PREDICTED: putative E3 ubiquitin-protein lig...   115   4e-24
ref|XP_002516824.1| conserved hypothetical protein [Ricinus comm...   114   8e-24

>ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 883

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = -1

Query: 237 GQATTCDHCSISQDLPDGLKLELGLYGPGSSSEVGPSKPREELEADEFHDADWSDLTEAQ 58
           GQA+  D CS+SQD  DGLKL+LGL  P  SS+V  S+P+EELE DEFHDADWSDLTEAQ
Sbjct: 66  GQASASDMCSVSQDHSDGLKLDLGLSSPLPSSDVRLSQPKEELEVDEFHDADWSDLTEAQ 125

Query: 57  LEELVLSNLDTIFKSAIKK 1
           LEELVLSNLDTIFKSA+KK
Sbjct: 126 LEELVLSNLDTIFKSAVKK 144


>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Vitis
           vinifera]
          Length = 893

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/79 (73%), Positives = 66/79 (83%)
 Frame = -1

Query: 237 GQATTCDHCSISQDLPDGLKLELGLYGPGSSSEVGPSKPREELEADEFHDADWSDLTEAQ 58
           GQ   C  C+++QD  DGLKL+LGL     SSEVGPS+PR+ELEAD+F DADWSDLTE+Q
Sbjct: 69  GQPGACGMCNLNQDHSDGLKLDLGLSSAAGSSEVGPSQPRDELEADDFQDADWSDLTESQ 128

Query: 57  LEELVLSNLDTIFKSAIKK 1
           LEELVLSNLDTIFKSAIKK
Sbjct: 129 LEELVLSNLDTIFKSAIKK 147


>ref|XP_003528662.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 890

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/79 (73%), Positives = 65/79 (82%)
 Frame = -1

Query: 237 GQATTCDHCSISQDLPDGLKLELGLYGPGSSSEVGPSKPREELEADEFHDADWSDLTEAQ 58
           GQA  CD C +SQD  DGLKL LGLY PG+S EVGPS+ ++E E DE +DADWSDLTEAQ
Sbjct: 66  GQAAACDLCGVSQDYSDGLKLGLGLYNPGTS-EVGPSQSKDEPETDEINDADWSDLTEAQ 124

Query: 57  LEELVLSNLDTIFKSAIKK 1
           LEELVL+NLDTI KSAIKK
Sbjct: 125 LEELVLTNLDTILKSAIKK 143


>ref|XP_003546114.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
           max]
          Length = 855

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/79 (73%), Positives = 65/79 (82%)
 Frame = -1

Query: 237 GQATTCDHCSISQDLPDGLKLELGLYGPGSSSEVGPSKPREELEADEFHDADWSDLTEAQ 58
           GQ +    CS+SQD  D LKL+LGL  P +SS+V  S+P+EELE DEFHDADWSDLTEAQ
Sbjct: 66  GQVSASGMCSVSQDHSDALKLDLGLSSPVASSDVRISQPKEELEVDEFHDADWSDLTEAQ 125

Query: 57  LEELVLSNLDTIFKSAIKK 1
           LEELVLSNLDTIFKSAIKK
Sbjct: 126 LEELVLSNLDTIFKSAIKK 144


>ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
           gi|223543912|gb|EEF45438.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 894

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/79 (70%), Positives = 66/79 (83%)
 Frame = -1

Query: 237 GQATTCDHCSISQDLPDGLKLELGLYGPGSSSEVGPSKPREELEADEFHDADWSDLTEAQ 58
           G ++ CD C ++QD  +GLKL+LGL    SSSEVG S+PREELE++E HDADWSDLTE+Q
Sbjct: 71  GPSSVCDLCGVNQDHSEGLKLDLGLSSALSSSEVGTSQPREELESEESHDADWSDLTESQ 130

Query: 57  LEELVLSNLDTIFKSAIKK 1
           LEELVLSNLD IFKSAIKK
Sbjct: 131 LEELVLSNLDAIFKSAIKK 149


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