BLASTX nr result

ID: Glycyrrhiza24_contig00028549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00028549
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554945.1| PREDICTED: DUF246 domain-containing protein ...   139   2e-31
ref|XP_003551780.1| PREDICTED: DUF246 domain-containing protein ...    89   3e-16
ref|XP_002525944.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_003530456.1| PREDICTED: DUF246 domain-containing protein ...    85   5e-15
emb|CBI16925.3| unnamed protein product [Vitis vinifera]               74   1e-11

>ref|XP_003554945.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 508

 Score =  139 bits (351), Expect = 2e-31
 Identities = 72/87 (82%), Positives = 77/87 (88%)
 Frame = -2

Query: 266 VSDGKGDNHCDSEEMEMGFNVLSGGGGEVVKSKRFIVKPRIKVWLARAITTVILWTSVVQ 87
           +SDGKGD HCDSEEMEMGFNVL GGG E+VKSKR IV+P IKVW+ARAITTVILWT VVQ
Sbjct: 1   MSDGKGD-HCDSEEMEMGFNVL-GGGDEIVKSKRLIVRPGIKVWMARAITTVILWTCVVQ 58

Query: 86  LMALGELWGPRLLLKGMPYCFSHPDVS 6
           LMA+GEL GPR LLKGMPYCFSH D S
Sbjct: 59  LMAIGELRGPR-LLKGMPYCFSHQDAS 84


>ref|XP_003551780.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 505

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/76 (61%), Positives = 59/76 (77%)
 Frame = -2

Query: 236 DSEEMEMGFNVLSGGGGEVVKSKRFIVKPRIKVWLARAITTVILWTSVVQLMALGELWGP 57
           DS+ ++M   VL+    +V K + FI++PRIKVW+ARAIT V+LWTS+VQL+ALGEL GP
Sbjct: 12  DSKGIKMELKVLATD--KVEKHESFIIRPRIKVWMARAITFVVLWTSLVQLIALGELLGP 69

Query: 56  RLLLKGMPYCFSHPDV 9
             LLKGMPYCFS P V
Sbjct: 70  S-LLKGMPYCFSSPPV 84


>ref|XP_002525944.1| conserved hypothetical protein [Ricinus communis]
           gi|223534773|gb|EEF36464.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/74 (58%), Positives = 52/74 (70%)
 Frame = -2

Query: 230 EEMEMGFNVLSGGGGEVVKSKRFIVKPRIKVWLARAITTVILWTSVVQLMALGELWGPRL 51
           +E EM   +L  G  E +K+     +  +K+W+ RAITT +LWT VVQLMALGELWGPR 
Sbjct: 9   KEWEMKVKLLGDGKVEKLKNSMVSSRSPMKLWILRAITTALLWTCVVQLMALGELWGPR- 67

Query: 50  LLKGMPYCFSHPDV 9
           LLKG P CFSHPDV
Sbjct: 68  LLKGWPSCFSHPDV 81


>ref|XP_003530456.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 499

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/94 (51%), Positives = 64/94 (68%)
 Frame = -2

Query: 290 MLLRWAAKVSDGKGDNHCDSEEMEMGFNVLSGGGGEVVKSKRFIVKPRIKVWLARAITTV 111
           M+L+W      GK D  CD++ ++M          +V K +  I++PRIK+W+ARAIT V
Sbjct: 1   MVLKW------GK-DYCCDTKGIKMEL--------KVEKHETLIIRPRIKMWMARAITIV 45

Query: 110 ILWTSVVQLMALGELWGPRLLLKGMPYCFSHPDV 9
           +LWTS+VQL+ALGEL GP  LL+GMPYCFS P V
Sbjct: 46  LLWTSLVQLIALGELLGPS-LLRGMPYCFSSPSV 78


>emb|CBI16925.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/79 (51%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = -2

Query: 239 CDSEEMEMGFNVLSGGGGEVVKSKRFIV-KPRIKVWLARAITTVILWTSVVQLMALGELW 63
           C  EE+E       G    V K K  +V + R+KVW+ R +T+V++WT VVQLMAL E W
Sbjct: 26  CRVEELEWEM----GAKSRVEKLKNVMVCRSRMKVWMMRGMTSVLVWTCVVQLMALEETW 81

Query: 62  GPRLLLKGMPYCFSHPDVS 6
           GPR LLKG P CFSH D+S
Sbjct: 82  GPR-LLKGWPSCFSHSDLS 99


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